LOCUS BC004868 2117 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 30, mRNA (cDNA clone
MGC:10702 IMAGE:3833242), complete cds.
ACCESSION BC004868
VERSION BC004868.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2117)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2117)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC004868.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147434.
FEATURES Location/Qualifiers
source 1..2117
/db_xref="H-InvDB:HIT000032046"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10702 IMAGE:3833242"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2117
/gene="USP30"
/gene_synonym="FLJ40511"
/gene_synonym="MGC10702"
/db_xref="GeneID:84749"
/db_xref="HGNC:HGNC:20065"
CDS 127..1653
/gene="USP30"
/gene_synonym="FLJ40511"
/gene_synonym="MGC10702"
/codon_start=1
/product="ubiquitin specific peptidase 30"
/protein_id="AAH04868.1"
/db_xref="GeneID:84749"
/db_xref="HGNC:HGNC:20065"
/translation="MTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIW
GPITERKKRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTSQYSRDQKEPP
SHQYLSLTLLHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVI
TSSLEDERDRQPRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSNHWKSQHPFHGR
LTSNMVCKHCEHQSPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCD
NCTKIEAKGTLNGEKVEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHV
QFNEFLMMDIYKYHLLGHKPSQHNPKLNKNPGPTLELQDGPGAPTPVLNQPGAPKTQI
FMNGACSPSLLPTLSAPMPFPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRS
PPSARNPLSTSNQWLWVSDDTVRKASLQEVLSSSAYLLFYERVLSRMQHQSQECKSEE
"
BASE COUNT 532 a 569 c 508 g 508 t
ORIGIN
1 gttccgctgt ctcgggaacc gtcgtatccc tcggtccggc ggcggcggcg gcggcggcgg
61 tagcggagga gacggtttca ggcctccggt gcggctgcaa tgctgagctc ccgggccgag
121 gcggcgatga ccgcggccga cagggccatc cagcgcttcc tgcggaccgg ggcggccgtc
181 agatataaag tcatgaagaa ctggggagtt ataggtggaa ttgctgctgc tcttgcagca
241 ggaatatatg ttatttgggg tcccattaca gaaagaaaga agcgtagaaa agggcttgtg
301 cctggccttg ttaatttagg gaacacctgc ttcatgaact ccctgctaca aggcctgtct
361 gcctgtcctg ctttcatcag gtggctggaa gagttcacct cccagtactc cagggatcag
421 aaggagcccc cctcacacca gtatttatcc ttaacactct tgcaccttct gaaagccttg
481 tcctgccaag aagttactga tgatgaggtc ttagatgcaa gctgcttgtt ggatgtctta
541 agaatgtaca gatggcagat ctcatcattt gaagaacagg atgctcacga attattccat
601 gtcattacct cgtcattgga agatgagcga gaccgccagc ctcgggtcac acatttgttt
661 gatgtgcatt ccctggagca gcagtcagaa ataactccca aacaaattac ctgccgcaca
721 agagggtcac ctcaccccac atccaatcac tggaagtctc aacatccttt tcatggaaga
781 ctcactagta atatggtctg caaacactgt gaacaccaga gtcctgttcg atttgatacc
841 tttgatagcc tttcactaag tattccagcc gccacatggg gtcacccatt gaccctggac
901 cactgccttc accacttcat ctcatcagaa tcagtgcggg atgttgtgtg tgacaactgt
961 acaaagattg aagccaaggg aacgttgaac ggggaaaagg tggaacacca gaggaccact
1021 tttgttaaac agttaaaact agggaagctc cctcagtgtc tctgcatcca cctacagcgg
1081 ctgagctggt ccagccacgg cacgcctctg aagcggcatg agcacgtgca gttcaatgag
1141 ttcctgatga tggacattta caagtaccac ctccttggac ataaacctag tcaacacaac
1201 cctaaactga acaagaaccc agggcctaca ctggagctgc aggatgggcc gggagccccc
1261 acaccagttc tgaatcagcc aggggccccc aaaacacaga tttttatgaa tggcgcctgc
1321 tccccatctt tattgccaac gctgtcagcg ccgatgccct tccctctccc agttgttccc
1381 gactacagct cctccacata cctcttccgg ctgatggcag ttgtcgtcca ccatggagac
1441 atgcactctg gacactttgt cacttaccga cggtccccac cttctgccag gaaccctctc
1501 tcaactagca atcagtggct gtgggtctcc gatgacactg tccgcaaggc cagcctgcag
1561 gaggtcctgt cctccagcgc ctacctgctg ttctacgagc gcgtcctttc caggatgcag
1621 caccagagcc aggagtgcaa gtctgaagaa tgactgtgcc ctcctgcaag gctagagctg
1681 atggcactgt ctgcactgtc caggaaaaaa gtaaaactgt actgttgcgt gtgcaagcgg
1741 ccccactaga gccttccagc cttctggtgt gttctaagag caggctccac ctgggagcca
1801 gccccagttc acaccaaacc aggctccctg aacagtcctg ttcatgtgtg taggtggttc
1861 tgttgtgtta agaaagcatt cattatgtcc ggagtgtctt tttactcatc tgatacaggt
1921 aattaaaaga actcagattc ttgaagccac cgttttcata ttgtaatgtt aggtgttctc
1981 agaggggagg tacctttgtc taatcaacgt ttccacttag atcttttatt tttaataagc
2041 aggcccataa aaattgttga caagaattaa tgaaattatt aaaggcaaca atttagaaga
2101 aaaaaaaaaa aaaaaaa
//