LOCUS BC004865 2308 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens cleft lip and palate associated transmembrane protein
1, mRNA (cDNA clone MGC:10593 IMAGE:3840991), complete cds.
ACCESSION BC004865
VERSION BC004865.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2308)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2308)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (21-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004865.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: i Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4502896.
FEATURES Location/Qualifiers
source 1..2308
/db_xref="H-InvDB:HIT000032043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10593 IMAGE:3840991"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2308
/gene="CLPTM1"
/db_xref="GeneID:1209"
/db_xref="MIM:604783"
CDS 52..2112
/gene="CLPTM1"
/codon_start=1
/product="CLPTM1 protein"
/protein_id="AAH04865.1"
/db_xref="GeneID:1209"
/db_xref="MIM:604783"
/translation="MAAAQEADGARSAVVAAGGGSSGQVTSNGSIGRDPPAETQPQNP
PAQPAPNAWQVIKGVLFRIFIIWAISSWFRRGPAPQDQAGPGGAPRVASRNLFPKDTL
MNLHVYISEHEHFTDFNATSALFWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQ
NGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKRRRFQKTKNLLTGETEA
DPEMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYY
PIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQLYAAQSTKSPWNFLGDEL
YEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLS
VRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDREHRVAG
IFPRLSFKDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWYSWVL
SMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVM
YRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEDPTAAAPVAEVPTAAGALTPT
PAPTTTTATREEASTSLPTKPTQGASSASEPQGLFVEALSVPLSLCVSSHLALPAQHH
WESW"
BASE COUNT 474 a 751 c 629 g 454 t
ORIGIN
1 gtcggggacg gggcggggct ggcggcgggg gcggggaccc ggagcgggaa gatggcggcg
61 gcgcaggagg cggacggggc ccgcagcgcc gtggtggcgg ccgggggagg cagctccggt
121 caggtgacca gcaatggcag catcgggagg gacccgccag cggagaccca gcctcagaac
181 ccaccggccc agccggcacc caatgcctgg caggtcatca aaggtgtgct gtttaggatc
241 ttcatcatct gggccatcag cagttggttc cgccgagggc cggcccctca ggaccaggcg
301 ggccccggag gagccccacg cgtcgccagc cgcaacctgt tccccaaaga cactttaatg
361 aacctgcatg tgtacatctc agagcacgag cactttacag acttcaacgc cacgtcggca
421 ctcttctggg aacagcacga tcttgtgtat ggcgactgga ctagcggcga gaactcagac
481 ggctgctacg agcactttgc tgagctcgat atcccacaga gcgtccagca gaacggctcc
541 atctacatcc acgtttactt caccaagagt ggcttccacc cagacccccg gcagaaggcc
601 ctgtaccgcc ggcttgccac agtccacatg tcccggatga tcaacaaata caagcgcaga
661 cgatttcaga aaaccaagaa cctgctgaca ggagagacag aagcggaccc agaaatgatc
721 aagagggctg aggactatgg gcctgtggag gtgatctccc attggcaccc caacatcacc
781 atcaacatcg tggacgacca cacgccgtgg gtgaagggca gtgtgccccc tcccctggat
841 caatatgtga agttcgacgc cgtgagcggt gactactatc ccatcatcta cttcaatgac
901 tactggaacc tgcagaagga ctactacccc atcaacgaga gcctggccag cctgccgctc
961 cgcgtctcct tctgcccgct ctcgctttgg cgctggcagc tctatgctgc ccagagcacc
1021 aagtcgccct ggaacttcct gggtgatgag ttgtacgagc agtcagatga ggagcaggac
1081 tcggtgaagg tggccctgct ggagaccaac ccctacctgc tggcgctcac catcatcgtg
1141 tctatcgttc acagtgtctt cgagttcctg gccttcaaga atgatatcca gttctggaac
1201 agccggcagt ccctggaggg cctgtccgtg cgctccgtct tcttcggcgt tttccagtca
1261 ttcgtggtcc tcctctacat cctggacaac gagaccaact tcgtggtcca ggtcagcgtc
1321 ttcattgggg tcctcatcga cctctggaag atcaccaagg tcatggacgt ccggctggac
1381 cgagagcaca gggtggcagg aatcttcccc cgcctatcct tcaaggacaa gtccacgtat
1441 atcgagtcct cgaccaaagt gtatgatgat atggcattcc ggtacctgtc ctggatcctc
1501 ttcccgctcc tgggctgcta tgccgtctac agtcttctgt acctggagca caagggctgg
1561 tactcctggg tgctcagcat gctctacggc ttcctgctga ccttcggctt catcaccatg
1621 acgccccagc tcttcatcaa ctacaagctc aagtctgtgg cccaccttcc ctggcgcatg
1681 ctcacctaca aggccctcaa cacattcatc gacgacctgt tcgcctttgt catcaagatg
1741 cccgttatgt accggatcgg ctgcctgcgg gacgatgtgg ttttcttcat ctacctctac
1801 caacggtgga tctaccgcgt cgaccccacc cgagtcaacg agtttggcat gagtggagaa
1861 gaccccacag ctgccgcccc cgtggccgag gttcccacag cagcaggggc cctcacgccc
1921 acacctgcac ccaccacgac caccgccacc agggaggagg cctccacgtc cctgcccacc
1981 aagcccaccc agggggccag ctctgccagc gagccccagg gtttgtttgt ggaggcgctg
2041 tctgtccctc tgtccctctg tgtttccagc catctcgccc tgccagccca gcaccactgg
2101 gaatcatggt gaagctgatg cagcgttgcc gagggggtgg gttgggcggg ggtggggccg
2161 ggccccccta cgggatgccc acggccgttc atcatcttgt ccctcgtccc cctaccacac
2221 tccccctcct agaccgccgc cctttaacac agtctggatt taataaattc atatgggtgt
2281 ttaacttaaa aaaaaaaaaa aaaaaaaa
//