LOCUS BC004557 2062 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DENN/MADD domain containing 2D, mRNA (cDNA clone
MGC:11390 IMAGE:3957641), complete cds.
ACCESSION BC004557
VERSION BC004557.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2062)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2062)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004557.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: p Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147689.
FEATURES Location/Qualifiers
source 1..2062
/db_xref="H-InvDB:HIT000032023"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11390 IMAGE:3957641"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2062
/gene="DENND2D"
/gene_synonym="FLJ22457"
/gene_synonym="RP5-1180E21.2"
/db_xref="GeneID:79961"
/db_xref="HGNC:HGNC:26192"
CDS 201..1616
/gene="DENND2D"
/gene_synonym="FLJ22457"
/gene_synonym="RP5-1180E21.2"
/codon_start=1
/product="DENN/MADD domain containing 2D"
/protein_id="AAH04557.1"
/db_xref="GeneID:79961"
/db_xref="HGNC:HGNC:26192"
/translation="MEGQVVGRVFRLFQRRLLQLRAGPPQDNSGEALKEPERAQEHSL
PNFAGGQHFFEYLLVVSLKKKRSEDDYEPIITYQFPKRENLLRGQQEEEERLLKAIPL
FCFPDGNEWASLTEYPRETFSFVLTNVDGSRKIGYCRRLLPAGPGPRLPKVYCIISCI
GCFGLFSKILDEVEKRHQISMAVIYPFMQGLREAAFPAPGKTVTLKSFIPDSGTEFIS
LTRPLDSHLEHVDFSSLLHCLSFEQILQIFASAVLERKIIFLAEGLSTLSQCIHAAAA
LLYPFSWAHTYIPVVPESLLATVCCPTPFMVGVQMRFQQEVMDSPMEEVLLVNLCEGT
FLMSVGDEKDILPPKLQDDILDSLGQGINELKTAEQINEHVSGPFVQFFVKIVGHYAS
YIKREANGQGHFQERSFCKALTSKTNRRFVKKFVKTQLFSLFIQEAEKSKNPPAGYFQ
QKILEYEEQKKQKKPREKTVK"
BASE COUNT 522 a 536 c 505 g 499 t
ORIGIN
1 cctgggtccc gtcacatcct tcttgctcaa ccactgggtg cacaggatgg aaacttctat
61 tccctctctg gaagacagcg cgtggcttgg cttcacagag ttgtggctgg agaccgaagc
121 agcccctttc tcaggcttac tgtcaccagt ctgtctgtgt taggggagag gggagtccgc
181 tctgtcctga aggcccagag atggaaggac aagtggtagg ccgggtgttc aggctcttcc
241 aacgccgact gcttcaactc cgagcaggac caccccagga caattcaggg gaagctttaa
301 aggaaccaga aagggcccag gagcactctt tgcccaactt tgctgggggg cagcacttct
361 ttgaatacct tcttgtggtt tctctcaaaa agaagcgttc agaggatgat tacgagccta
421 taatcaccta ccaatttccc aagcgggaga acctgcttcg gggtcagcag gaggaggagg
481 agcggctgct caaagctatc cccttgttct gcttcccaga tgggaatgag tgggcatcac
541 tcaccgagta tcccagggag accttctcct tcgttctgac caatgtggat gggagcagaa
601 agattggata ctgcaggcgc ctcttgcctg ccggccctgg ccctcgcctt cccaaagtgt
661 actgcatcat cagctgcatc ggctgcttcg gcttgttctc caagatcctg gatgaagtgg
721 agaagagaca tcagatctcc atggctgtca tctacccgtt catgcagggc ctccgagagg
781 cagccttccc tgctcctggg aagactgtca ctctcaagag cttcatcccc gactcaggca
841 ctgagttcat ttcactgaca cggcccctgg actcccacct agaacatgtg gattttagtt
901 ctctattgca ctgtctcagt tttgaacaga tacttcagat ctttgcctct gccgtgctgg
961 agagaaaaat catcttcctg gcggaaggtc tcagcacctt gtctcagtgc atccatgctg
1021 ctgccgcact gctctacccc ttcagctggg cgcacaccta catccctgtt gtccctgaga
1081 gccttctggc caccgtctgc tgccccaccc ccttcatggt tggagtacaa atgcgcttcc
1141 agcaggaggt catggacagc cctatggaag aggtcctgct ggtcaatctt tgtgaaggaa
1201 ccttcttaat gtcggttggt gatgaaaaag acatcctgcc accgaagctt caggatgaca
1261 tcttagactc tcttggtcag gggatcaatg agttaaagac tgcagaacaa atcaacgagc
1321 atgtttcagg cccctttgtg cagttctttg tcaagattgt gggccattat gcttcctata
1381 tcaagcggga ggcaaatggg caaggccact tccaagaaag atccttctgt aaggctctga
1441 cctccaagac caaccgccga tttgtgaaga agtttgtgaa gacacagctc ttctcacttt
1501 tcatccagga agccgagaag agcaagaatc ctcctgcagg ctatttccaa cagaaaatac
1561 ttgaatatga ggaacagaag aaacagaaga aaccaaggga aaaaactgtg aaataagagc
1621 tgtggtgaat aagaatgact agagctacac accatttctg gacttcagcc cctgccagtg
1681 tggcaggatc agcaaaactg tcagctccca aaatccatat cctcactctg agtcttggta
1741 tccaggtatt gcttcaaact ggtgtctgag atttggatcc ctggtattga tttctcagga
1801 ctttggaggg ctctgacacc atgctcacag aactgggctc agagctccat tttttgcaga
1861 ggtgacacag gtaggaaaca gtagtacatg tgttgtagac acttggttag aagctgctgc
1921 aactgccctc tcccatcatt ataacatctt caacacagaa cacactttgt ggtcgaaagg
1981 ctcagcctct ctacatgaag tctgtggaca tgtaaggacg agagtaaaga ggaaaatctt
2041 ataaaaaaaa aaaaaaaaaa aa
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