LOCUS BC004530 1621 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens tRNA splicing endonuclease 34 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:3044 IMAGE:3342968), complete cds.
ACCESSION BC004530
VERSION BC004530.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1621)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1621)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004530.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: b Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1621
/db_xref="H-InvDB:HIT000032005"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3044 IMAGE:3342968"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1621
/gene="TSEN34"
/gene_synonym="SEN34"
/gene_synonym="SEN34L"
/db_xref="GeneID:79042"
/db_xref="HGNC:HGNC:15506"
/db_xref="MIM:608754"
CDS 312..1244
/gene="TSEN34"
/gene_synonym="SEN34"
/gene_synonym="SEN34L"
/codon_start=1
/product="TSEN34 protein"
/protein_id="AAH04530.1"
/db_xref="GeneID:79042"
/db_xref="HGNC:HGNC:15506"
/db_xref="MIM:608754"
/translation="MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNS
RLGLPLLLMPEEARLLAEIGAVTLVSAPRPDSRHHSLALTSFKRQQEESFQEQSALAA
EARETRRQELLEKITEGQAAKKQKLEQASGASSSQEAGSSQAAKEDETSDGQASGEQE
EAGPSSSQAGPSNGVAPLPRSALLVQLATARPRPVKARPLDWRVQSKDWPHAGRPAHE
LRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDTIPLQDLVA
AGRLGTSVRKTLLLCSPQPDGKVVYTSLQWASLQ"
BASE COUNT 357 a 451 c 488 g 325 t
ORIGIN
1 cgaggacgcc cgaacgccga acttcctgtg ctcgggaggg ggcagggttt tgtactgtgg
61 gagtctgaga gcgaggaggt ccgaaagccg aatcacagtc gttcggaaag aggaggagcg
121 aaggctcgag cgtccggaag agggtgtggc ctcggcggtg ccttagcctc cagagcttct
181 gaccgctgac gggaacaccc gaagggggac gcccactttg caagagggtg gtgccaaaat
241 ggacctttgt aagggggcgt gtcgccgcgc ttgcggaggt ttgtttttca cgctccaagg
301 cgcaatggag gatgctggtg gtggaggtgg cgaacggccg ctccctggtg tggggagccg
361 aggcggtgca ggccctccgg gagcgcctgg gtgtgggggg ccgcacggta ggcgccctgc
421 cccgcgggcc ccgccagaac tcgcgcctgg gcctcccgct gctgctgatg cccgaagagg
481 cgcggctctt ggccgagatc ggcgccgtga ctctggtcag cgccccgcgt ccagactctc
541 ggcaccacag cctggccctg acatccttca agcgccagca agaggagagc ttccaggagc
601 agagcgcctt ggcagctgag gcccgggaga cccgtcgtca ggagctcctg gagaagatta
661 cggagggcca ggctgctaag aagcagaaac tagaacaggc ttcaggggcc agctcaagcc
721 aggaggccgg ctcgagccag gctgccaaag aggatgagac cagtgatggc caggcttcgg
781 gagagcagga ggaagctggc ccctcgtctt cccaagcagg accctcaaat ggggtagccc
841 ccttgcccag atctgctctc cttgtccagc tggccactgc caggcctcga ccggtcaagg
901 ccaggcccct ggactggcgt gtccagtcta aagactggcc ccacgccggc cgccctgccc
961 acgagctgcg ctacagtatc tacagagacc tgtgggagcg aggcttcttc ctcagtgcgg
1021 ctggcaagtt cggaggtgac ttcctggtct atcctggtga ccccctccgc ttccacgccc
1081 attatatcgc tcagtgctgg gcccctgagg acaccatccc actccaagac ctggttgctg
1141 ctgggcgcct tggaaccagc gtcagaaaga ccctgctcct ctgttctccg cagcctgatg
1201 gtaaggtggt ctacacctcc ctgcaatggg ctagcctgca gtgaactcca gagacctagg
1261 ggatgtggct gtgtcggcag caagagcctt tctggatgtt ccccagctct tctctgggag
1321 tctagaacat cctcctacct ttctccgcgg ttagtttttg attccaggtt ttcgaacact
1381 acatcttttt tatgttcttc cttgtttcaa agcacttatt ggctgtgttt ttgtagttac
1441 ctattttcac actgtgagct tcccgagaat ggggcctggg tttgattcat ctgttttcta
1501 cagggtttaa gtctcaggag gtctcaataa acttggtata taaatgttaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 a
//