LOCUS BC004530 1621 bp mRNA linear HUM 06-JUN-2006 DEFINITION Homo sapiens tRNA splicing endonuclease 34 homolog (S. cerevisiae), mRNA (cDNA clone MGC:3044 IMAGE:3342968), complete cds. ACCESSION BC004530 VERSION BC004530.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1621) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1621) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC004530.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: b Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1621 /db_xref="H-InvDB:HIT000032005" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3044 IMAGE:3342968" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1621 /gene="TSEN34" /gene_synonym="SEN34" /gene_synonym="SEN34L" /db_xref="GeneID:79042" /db_xref="HGNC:HGNC:15506" /db_xref="MIM:608754" CDS 312..1244 /gene="TSEN34" /gene_synonym="SEN34" /gene_synonym="SEN34L" /codon_start=1 /product="TSEN34 protein" /protein_id="AAH04530.1" /db_xref="GeneID:79042" /db_xref="HGNC:HGNC:15506" /db_xref="MIM:608754" /translation="MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNS RLGLPLLLMPEEARLLAEIGAVTLVSAPRPDSRHHSLALTSFKRQQEESFQEQSALAA EARETRRQELLEKITEGQAAKKQKLEQASGASSSQEAGSSQAAKEDETSDGQASGEQE EAGPSSSQAGPSNGVAPLPRSALLVQLATARPRPVKARPLDWRVQSKDWPHAGRPAHE LRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDTIPLQDLVA AGRLGTSVRKTLLLCSPQPDGKVVYTSLQWASLQ" BASE COUNT 357 a 451 c 488 g 325 t ORIGIN 1 cgaggacgcc cgaacgccga acttcctgtg ctcgggaggg ggcagggttt tgtactgtgg 61 gagtctgaga gcgaggaggt ccgaaagccg aatcacagtc gttcggaaag aggaggagcg 121 aaggctcgag cgtccggaag agggtgtggc ctcggcggtg ccttagcctc cagagcttct 181 gaccgctgac gggaacaccc gaagggggac gcccactttg caagagggtg gtgccaaaat 241 ggacctttgt aagggggcgt gtcgccgcgc ttgcggaggt ttgtttttca cgctccaagg 301 cgcaatggag gatgctggtg gtggaggtgg cgaacggccg ctccctggtg tggggagccg 361 aggcggtgca ggccctccgg gagcgcctgg gtgtgggggg ccgcacggta ggcgccctgc 421 cccgcgggcc ccgccagaac tcgcgcctgg gcctcccgct gctgctgatg cccgaagagg 481 cgcggctctt ggccgagatc ggcgccgtga ctctggtcag cgccccgcgt ccagactctc 541 ggcaccacag cctggccctg acatccttca agcgccagca agaggagagc ttccaggagc 601 agagcgcctt ggcagctgag gcccgggaga cccgtcgtca ggagctcctg gagaagatta 661 cggagggcca ggctgctaag aagcagaaac tagaacaggc ttcaggggcc agctcaagcc 721 aggaggccgg ctcgagccag gctgccaaag aggatgagac cagtgatggc caggcttcgg 781 gagagcagga ggaagctggc ccctcgtctt cccaagcagg accctcaaat ggggtagccc 841 ccttgcccag atctgctctc cttgtccagc tggccactgc caggcctcga ccggtcaagg 901 ccaggcccct ggactggcgt gtccagtcta aagactggcc ccacgccggc cgccctgccc 961 acgagctgcg ctacagtatc tacagagacc tgtgggagcg aggcttcttc ctcagtgcgg 1021 ctggcaagtt cggaggtgac ttcctggtct atcctggtga ccccctccgc ttccacgccc 1081 attatatcgc tcagtgctgg gcccctgagg acaccatccc actccaagac ctggttgctg 1141 ctgggcgcct tggaaccagc gtcagaaaga ccctgctcct ctgttctccg cagcctgatg 1201 gtaaggtggt ctacacctcc ctgcaatggg ctagcctgca gtgaactcca gagacctagg 1261 ggatgtggct gtgtcggcag caagagcctt tctggatgtt ccccagctct tctctgggag 1321 tctagaacat cctcctacct ttctccgcgg ttagtttttg attccaggtt ttcgaacact 1381 acatcttttt tatgttcttc cttgtttcaa agcacttatt ggctgtgttt ttgtagttac 1441 ctattttcac actgtgagct tcccgagaat ggggcctggg tttgattcat ctgttttcta 1501 cagggtttaa gtctcaggag gtctcaataa acttggtata taaatgttaa aaaaaaaaaa 1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1621 a //