LOCUS BC004525 1904 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2O, mRNA (cDNA clone
IMAGE:3502303), partial cds.
ACCESSION BC004525
VERSION BC004525.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1904)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1904)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC004525.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: m Column: 3.
FEATURES Location/Qualifiers
source 1..1904
/db_xref="H-InvDB:HIT000086389"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3502303"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1904
/gene="UBE2O"
/gene_synonym="E2-230K"
/gene_synonym="FLJ12878"
/gene_synonym="KIAA1734"
/db_xref="GeneID:63893"
/db_xref="HGNC:HGNC:29554"
/db_xref="IMGT/GENE-DB:29554"
/db_xref="MIM:29554"
CDS <1..759
/gene="UBE2O"
/gene_synonym="E2-230K"
/gene_synonym="FLJ12878"
/gene_synonym="KIAA1734"
/codon_start=1
/product="UBE2O protein"
/protein_id="AAH04525.2"
/db_xref="GeneID:63893"
/db_xref="HGNC:HGNC:29554"
/db_xref="IMGT/GENE-DB:29554"
/db_xref="MIM:29554"
/translation="VSLLGTWIGKGTERWTSKSSLLQVLISIQGLILVNEPYYNEAGF
DSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVFEQEIRQHFSTGGWRLVNRI
ESWLETHALLEKAQALPNGVPKASSSPEPPAVAELSDSGQQEPEDGGPAPGEASQGSD
SEGGAQSLASASRDHTDQTSETAPDASVPPSVKPKKRRKSYRSFLPEKSGYPDIGFPL
FPLSKGFIKSIRGVLTQFRAALLEAGMPECTEDK"
BASE COUNT 433 a 563 c 531 g 377 t
ORIGIN
1 gtcagcctcc tgggcacctg gattggaaag gggacagaga ggtggacaag caagtccagc
61 cttctccagg tgctcatctc catccaaggt ctgatcctgg taaatgaacc atactacaac
121 gaagccggct tcgacagtga ccgaggcctg caggaaggct atgaaaacag tcgctgttac
181 aatgagatgg cgctgatccg cgtggtgcag tccatgaccc agctggtgcg gcggcccccc
241 gaggtctttg agcaggagat caggcaacac tttagcactg gtggctggcg gctggtgaac
301 cgtatcgagt cctggctgga aacccatgcc ctgctggaga aggcccaggc actgcccaac
361 ggggtgccca aggccagcag ctcgccagag cccccagctg tagccgagct gtcagactcc
421 ggccaacaag aacctgagga tggagggcca gccccaggag aggcctccca gggctcagac
481 tcagagggcg gtgcccagag cctggcctca gctagcaggg accacacaga ccagacttcg
541 gagaccgcac cagacgcatc ggtgccaccc agtgtgaaac caaagaagcg gagaaagagc
601 taccggagct tcttacctga gaagagtggc taccctgaca tcggcttccc cctcttccca
661 ctttccaagg gtttcatcaa gagcatccgg ggtgtcctga cgcagttccg ggctgccctg
721 ctagaggcag gcatgccgga gtgcacagag gacaagtagc tgccaggcac agaggaaaga
781 gcatcaccgt gggagaggcc agccgccgcc tgctcactcc cccccggaat cacccctctt
841 cccatgcccc tctgtcccca ctgcaaaccc actgccctct tctccccaag gtgagtttga
901 tgctgaagtg caagaagtgt gttgagatgc tgccgtttct attttgaagc gagctttcaa
961 caggcgggtc ccctgtggca aagaaaatcg gaaccctgtt gccgattttc catttgtcac
1021 cccagcagaa tgtccggcac ttgctccctt gctgcccctt ctcaggtcag aggcgggtgt
1081 tccagggcct gccgcggggc tctctgggcc ggttccctgc agacccgcag gagagcacat
1141 gtgccttgca tgaagtgtgg gttgcgccaa caattcccct ggtccctttc aacctgttta
1201 gttcaactca agcctccctg tgtcccagac cctcctgctg ccaccaccac ccaggtcctc
1261 cctagtcctc cagcgtcaac actatccctt gggagttgta gctgctgtca ctgactcccg
1321 gctatacatg gcctgtcgac cacgttatag ccctcaggcc tgttgaactt gctctctaag
1381 agaggttggg accaggctag gttccgggtg acgcccagga gaggtggtgg ccttcacaca
1441 tgcacatgga gttgaggacc agggagctgc agggaaagca acagctatag gtgccttgct
1501 cttctgtcgg aggctgctgg gggcaagagc agctgcacaa ggccagggca agtgctaggg
1561 cccctccccc atcacatggt cacactggga caggcgtgca gctcactgaa ctccaagcga
1621 gccagccctc tcttggacta gaaggcctac tgtcagccct tcgcttacaa actgcaggct
1681 caatccgaag gggacggccg gcgggggctc tcctagtgcc cagagacagg cccagaggtt
1741 tacaagtttt ctaagctttt gataatgtga agctccaggc cgagaggatg ctgttgagca
1801 cattgcagct atgtaatttt tggtgtatgt atgtaatatt taaggttgga aaaaaaactc
1861 aaaagcaaag atattaactc ttattagaaa aaaaaaaaaa aaaa
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