LOCUS BC004524 2204 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens EF-hand calcium binding domain 4B, mRNA (cDNA clone IMAGE:3531511), complete cds. ACCESSION BC004524 VERSION BC004524.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2204) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2204) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC004524.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 11 Row: n Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147431 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2204 /db_xref="H-InvDB:HIT000032002" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3531511" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2204 /gene="EFCAB4B" /gene_synonym="MGC4266" /db_xref="GeneID:84766" /db_xref="HGNC:HGNC:28657" CDS 470..1657 /gene="EFCAB4B" /gene_synonym="MGC4266" /codon_start=1 /product="EF-hand calcium binding domain 4B" /protein_id="AAH04524.1" /db_xref="GeneID:84766" /db_xref="HGNC:HGNC:28657" /translation="MAAPDGRVVSRPQRLGQGSGQGPKGSGACLHPLDSLEQKETQEQ TSGQLVMLRKAQEFFQTCDAEGKGFIARKDMQRLHKELPLSLEELEDVFDALDADGNG YLTPQEFTTGFSHFFFSQNNPSQEDAGEQVAQRHEEKVYLSRGDEDLGDMGEDEEAQF RMLMDRLGAQKVLEDESDVKQLWLQLKKEEPHLLSNFEDFLTRIISQLQEAHEEKNEL ECALKRKIAAYDEEIQHLYEEMEQQIKSEKEQFLLKDTERFQARSQELEQKLLCKEQE LEQLTQKQKRLEGQCTALHHDKHETKAENTKLKLTNQELARELERTSWELQDAQQQLE SLQQEACKLHQEKEMEVYRVTESLQREKAGLLKQLDFLRCVGGHWPVLRAPPRSLGSE GPV" BASE COUNT 591 a 528 c 647 g 438 t ORIGIN 1 gtcgggcgga gcaggcggct gcttgacagc tgagagccga gcgggcggcg cgggcaggtc 61 cacgggaagc ctacacgccc aaggtcatgc cctgaccaca gctgcccttc aggaggctgg 121 cacggagcca cctggggcca ttgggctgtt tgtcaagggt ggggcagcag caacttgcca 181 ctcttcctcc atgagcccag ccagagcctc cactgggcac ttagcacaag aaaaaccctg 241 caggagccgg atccagagcg ctgggattca gcaggagtgc caggagaatt caacacaggt 301 gtgctgcctc ctctcctgcc aggtgtgtgg ctgcacagga gtcttgctga tggtggaatt 361 caagtcacca gtggccaaag taccctccag gtgtgaagag ttgcaggtcc tccgaggagc 421 cgggagctgc aaggttctga aaaagacttc aagaaactga ctaatcgcga tggctgcccc 481 tgacgggagg gtagtctcca gaccccagag acttggtcag gggtctggcc aggggccaaa 541 ggggagtgga gcctgcctgc atcccctgga cagcctggag cagaaggaga ctcaggagca 601 aacgtcgggc cagctagtca tgctgaggaa ggcacaggag ttctttcaga cctgtgatgc 661 tgaaggcaag ggcttcatcg ccaggaagga tatgcagagg ctgcataagg agctaccgct 721 cagcctggag gaactggagg atgtgtttga tgccctggat gctgatggca atggctatct 781 gaccccacag gagttcacta ctggatttag tcacttcttc ttcagccaga ataacccaag 841 tcaggaagat gcaggtgaac aggtggccca gcgccatgaa gagaaggtgt atctgtccag 901 aggggatgag gatctgggcg acatgggcga agatgaggaa gcccagttcc ggatgctgat 961 ggacagactt ggagcccaaa aggtgttgga agatgaaagt gatgtcaagc agctctggtt 1021 gcagctgaag aaggaggaac ctcatttact gtccaacttt gaagacttcc tgaccagaat 1081 catctcccag ctccaagaag cccatgagga gaagaatgaa ctggagtgtg ccctaaaaag 1141 gaaaattgct gcttatgatg aagaaatcca gcatctctat gaggagatgg aacaacaaat 1201 caaaagtgag aaggagcagt ttctcctgaa ggacacagag aggtttcaag cccgcagtca 1261 agagctggag cagaaactgt tatgtaagga gcaggagctg gagcagctca cccagaagca 1321 gaaaaggctg gaaggtcagt gcacagccct gcatcatgac aagcatgaga ccaaggctga 1381 gaataccaag ctgaaactca ctaaccagga gctggcccgg gagctggagc ggacttcctg 1441 ggagctccag gatgctcagc agcagttgga aagcctccag caagaggcct gcaaactcca 1501 ccaagagaag gagatggaag tgtaccgtgt gacggagagt ctacagcgtg agaaggccgg 1561 gctcctcaag cagctggatt tcctaaggtg cgtcggtggg cactggcctg tgctgagagc 1621 acctcccaga agcctggggt cggaaggacc agtctgaggg tcatccttgc ctacgtgctg 1681 gaaaaacgtg cctgctgaga gagtgccctc aattcccttg gtccccagtg cagtgtttgg 1741 accaccaagt agccactcta ttatgtttgg tccgtttaca catgcgccca catccagttt 1801 attcctcctg gtggggaggc tctgccccac tcctctgagt ccctcacagg actgtgcttg 1861 gtacttgatc tcatgcgagc agagctgggt ttaatgagca tttaatctat gctagaaata 1921 ttatctcgtt cattgtcagc aaaactgtta ggtgagtagg gcagttcatt cacaggaatt 1981 tactgatggg aagttgatat tagaggaaag aagtaattta ccacaggcga cacagctact 2041 ctctgatggg gccagaatgg aaatccgtaa ctcggctgtg ttctgttcat gtttgttgaa 2101 tgagtaaatg aatcacaaac agagcaccaa gaaaaagctt tctcagcctt caaagacccc 2161 cagcaataaa ctcaaagttt actggtaaaa aaaaaaaaaa aaaa //