LOCUS BC004518 1484 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synaptotagmin XVII, mRNA (cDNA clone MGC:11229
IMAGE:3938134), complete cds.
ACCESSION BC004518
VERSION BC004518.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1484)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1484)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC004518.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: l Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40068037.
FEATURES Location/Qualifiers
source 1..1484
/db_xref="H-InvDB:HIT000031997"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11229 IMAGE:3938134"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1484
/gene="SYT17"
/db_xref="GeneID:51760"
/db_xref="HGNC:HGNC:24119"
CDS 11..1435
/gene="SYT17"
/codon_start=1
/product="synaptotagmin XVII"
/protein_id="AAH04518.1"
/db_xref="GeneID:51760"
/db_xref="HGNC:HGNC:24119"
/translation="MAYIQLEPLNEGFLSRISGLLLCRWTCRHCCQKCYESSCCQSSE
DEVEILGPFPAQTPPWLMASRSSDKDGDSVHTASEVPLTPRTNSPDGRRSSSDTSKST
YSLTRRISSLESRRPSSPLIDIKPIEFGVLSAKKEPIQPSVLRRTYNPDDYFRKFEPH
LYSLDSNSDDVDSLTDEEILSKYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHD
GSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL
TVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSSQNEVELGELLLSLNYLPS
AGRLNVDVIRAKQLLQTDVSQGSDPFVKIQLVHGLKLVKTKKTSFLRGTIDPFYNESF
SFKVPQEELENASLVFTVFGHNMKSSNDFIGRIVIGQYSSGPSETNHWRRMLNTHRTA
VEQWHSLRSRAECDRVSPASLEVT"
BASE COUNT 361 a 424 c 380 g 319 t
ORIGIN
1 gcgggcgaaa atggcgtaca tccagttgga accattaaac gagggttttc tttctagaat
61 ctctggtctg ctgctgtgca gatggacctg ccggcactgc tgtcagaagt gctacgagtc
121 cagctgttgc cagtcaagtg aggatgaagt tgaaattctg ggacctttcc ctgctcagac
181 ccctccctgg ctgatggcca gccggagcag tgacaaggat ggtgactctg tccacacggc
241 cagcgaagtc ccgctgaccc cacggaccaa ttccccggat ggaagacgct cgtcctcaga
301 cacatccaag tctacataca gcctgacgcg gaggatttcg agtcttgagt caagacgtcc
361 cagctctcca ctcatcgata ttaaacccat cgagtttggc gttctcagcg ccaagaagga
421 gcccatccaa ccttcggtgc tcagacggac ctataacccc gacgactatt tcaggaagtt
481 cgaaccccac ctgtactccc tcgactccaa cagcgacgat gtggactctc tgacagacga
541 ggagatcctg tccaagtacc agctgggcat gctgcacttc agcactcagt acgacctgct
601 gcacaaccac ctcaccgtgc gtgtgatcga ggccagggac ctgccacctc ccatctccca
661 cgatggctcg cgccaggaca tggcgcactc caacccctac gtcaagatct gtctcctgcc
721 agaccagaag aactcaaagc agaccggggt caaacgcaag acccagaagc ccgtgtttga
781 ggagcgctac accttcgaga tccccttcct ggaggcccag aggaggaccc tgctcctgac
841 cgtggtggat tttgataagt tctcccgcca ctgtgtcatt gggaaagttt ctgtgccttt
901 gtgtgaagtt gacctggtca agggcgggca ctggtggaag gcgctgattc ccagttctca
961 gaatgaagtg gagctggggg agctgcttct gtcactgaat tatctcccaa gtgctggcag
1021 actgaatgtt gatgtcattc gagccaagca acttcttcag acagatgtga gccaaggttc
1081 agaccccttt gtgaaaatcc agctggtgca tggactcaaa cttgtgaaaa ccaagaagac
1141 gtccttctta aggggcacaa ttgatccttt ctacaatgaa tccttcagct tcaaagttcc
1201 ccaagaagaa ctggaaaatg ccagcctagt gtttacagtt ttcggccaca acatgaagag
1261 cagcaatgac ttcatcggga ggatcgtcat tggccagtac tcttcaggcc cctctgagac
1321 caaccactgg aggcgcatgc tcaacacgca ccgcacagcc gtggagcagt ggcatagcct
1381 gaggtcccga gctgagtgtg accgcgtgtc tcctgcctcc ctggaggtga cctgagggct
1441 gcagggaagg cagctttcat ttgtttaaaa aaaaaaaaaa aaaa
//