LOCUS BC004513 1989 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens GLI-Kruppel family member HKR1, mRNA (cDNA clone
IMAGE:3928207), partial cds.
ACCESSION BC004513
VERSION BC004513.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1989)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1989)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC004513.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: b Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1989
/db_xref="H-InvDB:HIT000086386"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3928207"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1989
/gene="HKR1"
/db_xref="GeneID:284459"
/db_xref="MIM:165250"
CDS <1..1271
/gene="HKR1"
/codon_start=3
/product="HKR1 protein"
/protein_id="AAH04513.2"
/db_xref="GeneID:284459"
/db_xref="MIM:165250"
/translation="EVSGFGEIKYEEFGPGFIKESNLLSLQKTQTGETPYMYTEWGDS
FGSMSVLIKNPRTHSGGKPYVCRECGRGFTWKSNLITHQRTHSGEKPYVCKDCGRGFT
WKSNLFTHQRTHSGLKPYVCKECGQSFSLKSNLITHQRAHTGEKPYVCRECGRGFRQH
SHLVRHKRTHSGEKPYICRECEQGFSQKSHLIRHLRTHTGEKPYVCTECGRHFSWKSN
LKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQRSHTGEKPFVCTECGRGFTRKSTLI
THQRTHSGEKPFVCAECGRGFNDKSTLISHQRTHSGEKPFMCRECGRRFRQKPNLFRH
KRAHSGAFVCRECGQGFCAKLTLIKHQRAHAGGKPHVCRECGQGFSRQSHLIRHQRTH
SGEKPYICRKCGRGFSRKSNLIRHQRTHSG"
BASE COUNT 573 a 456 c 505 g 455 t
ORIGIN
1 tagaagtctc aggatttgga gaaatcaaat atgaagagtt tgggccaggc tttatcaagg
61 agtcaaacct ccttagcctc cagaagacac aaactgggga gacaccttac atgtacactg
121 agtggggaga cagctttggc agtatgtcag tcctcatcaa aaacccaagg acacactctg
181 ggggaaagcc ttatgtgtgc agggaatgtg ggcgaggctt tacgtggaag tcaaacctga
241 tcacacatca gaggacacac tcaggggaga aaccttatgt gtgcaaggat tgtggacgag
301 gctttacttg gaagtcgaac ctctttacac atcagcggac acactcaggg ctcaagcctt
361 atgtgtgcaa ggaatgtggg cagagcttta gcctgaagtc aaacctcatt acccaccaga
421 gggcgcacac tggggagaag ccttatgttt gcagggaatg tgggcgtggc tttcgccagc
481 attcacacct ggtcagacac aagaggacac attcaggaga gaagccttac atttgcaggg
541 agtgtgagca aggctttagc cagaagtcac acctcatcag acacttaagg acacacacag
601 gagagaagcc ttatgtatgc acagaatgtg ggcgtcactt tagctggaaa tcaaacctca
661 aaacacacca gaggacacac tcaggggtta aaccttatgt ctgcctggag tgcgggcagt
721 gctttagcct gaagtcaaac cttaacaaac accagaggtc acacacgggg gagaagccat
781 ttgtatgtac ggagtgtggg cgaggcttta cccggaaatc aaccctgatc acgcaccaga
841 ggacacactc aggggagaag ccatttgtat gtgctgagtg tggacgaggc tttaatgata
901 agtccaccct catttcacac cagaggacac attcagggga aaagcctttt atgtgcaggg
961 agtgtggcag aaggtttcgg cagaagccta acctgtttag gcacaagagg gcacactcag
1021 gtgcctttgt gtgcagggag tgtgggcaag gcttttgtgc taagttaact ctcattaaac
1081 accagagagc acacgcaggg gggaagcctc atgtgtgcag ggagtgtggg caaggcttta
1141 gccggcagtc acacctcatt agacaccaga ggacacattc aggagagaag ccttatattt
1201 gcagaaagtg tggacggggc tttagtcgga agtccaacct tatcagacat cagaggacac
1261 actcaggata gaaactttat gtgtataggg aatgtggtac agcctttagc caggagtcat
1321 acttcatcag acaccagagg acacacacag tgctgtggct ttttcagcca ttgctagata
1381 ccaaagtgga gacattctgt gtgtgattat gcatgagact gtactggtaa gacttgtatc
1441 tccatccacc tgaaggagaa ttgctggctc attttcagga gccctgccct tcctcactgt
1501 ggatggtggg ttgtgaaacc cggtcaggta atgatagtgg caggaggcag tcaaatgccc
1561 aggcagatag gggtgggtac ctggtgaaac ccaaccttaa agctgaagac agtcccggct
1621 aaatcctcat actgaattga gaacctgtct tcccatttgg tgtgctttcc tccgattgat
1681 cccaaccctt cacctatttt acgtatacct gccctttcct aattggtttt tacactgctg
1741 tgcccacctt ttgagtggtg cctttgcata cttacaaatc agtcaacgtg tattccccta
1801 ttctgagccc ataaaagacc cagactcagc tgcagtgagg agagaaatca ccctgctgtg
1861 ggggttgggg accactccct gcatcccctc tccactgaga gctgttcttt tgctcaataa
1921 aattcttttc tacccatcct caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaa
//