LOCUS BC004494 988 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SNAP-associated protein, mRNA (cDNA clone MGC:11087
IMAGE:3830132), complete cds.
ACCESSION BC004494
VERSION BC004494.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 988)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 988)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC004494.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725677.
FEATURES Location/Qualifiers
source 1..988
/db_xref="H-InvDB:HIT000031989"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11087 IMAGE:3830132"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..988
/gene="SNAPAP"
/gene_synonym="SNAPIN"
/db_xref="GeneID:23557"
/db_xref="HGNC:HGNC:17145"
/db_xref="MIM:607007"
CDS 21..431
/gene="SNAPAP"
/gene_synonym="SNAPIN"
/codon_start=1
/product="SNAP-associated protein"
/protein_id="AAH04494.1"
/db_xref="GeneID:23557"
/db_xref="HGNC:HGNC:17145"
/db_xref="MIM:607007"
/translation="MAGAGSAAVSGAGTPVAGPTGRDLFAEGLLEFLRPAVQQLDSHV
HAVRESQVELREQIDNLATELCRINEDQKVALDLDPYVKKLLNARRRVVLVNNILQNA
QERLRRLNHSVAKETARRRAMLDSGIYPPGSPGK"
BASE COUNT 267 a 243 c 239 g 239 t
ORIGIN
1 gggcttcagg acaattcgtg atggcggggg ctggttccgc cgctgtatcg ggggcaggga
61 ccccggtggc ggggcccaca ggccgcgacc ttttcgccga agggctgctg gagttcctgc
121 gacccgctgt gcagcagctc gactctcacg tacacgccgt cagagagagc caggtagagc
181 tccgggaaca aattgacaac ctagccacag aactgtgccg cataaatgag gatcagaagg
241 tggccctgga tcttgacccc tatgttaaga agctacttaa tgcccggcga cgcgttgtct
301 tggttaacaa cattctacag aatgctcagg aacgactgag acggctaaac cacagtgttg
361 ccaaggaaac agcccgcagg agagcaatgc tggattcggg aatttacccc cctggctccc
421 caggcaaata acagatgagc ctatggactc agtagcacaa gtactgttcc ccagctgcct
481 tgtttcaaca gacatgcaaa gatcctagga gacagtcccc atagaccttc agacattaaa
541 aagggagccg tacagtttgt ttgaagcact tcgtcttacc catttatgta ggggccccag
601 gaaacctaca cacagccaga atgaggttcc caaaggactt acattaatta tggctcttgc
661 ttcctttcac aaatgagctg aggcctctac tttttttttt ttaagctgca tacttgaggc
721 ttaccttctt caggactagt taaccagagg ggcttccttt gtatgttaca tgcctggtta
781 catgggcctg gacagcatgt cctctacctg tgacttctca ttttcctgtt tacactgggg
841 atttggaggg ggcaggcaaa gtcaaagtga atgacctctg tccacccact tttttattgc
901 actggcttga atacagtagc agtgttgata gaatcatttt attcaataaa tacttaaaat
961 gaaaaaaaaa aaaaaaaaaa aaaaaaaa
//