LOCUS BC004471 457 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 10 open reading frame 116, mRNA (cDNA clone
MGC:10343 IMAGE:3688901), complete cds.
ACCESSION BC004471
VERSION BC004471.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 457)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 457)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC004471.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: o Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47078273.
FEATURES Location/Qualifiers
source 1..457
/db_xref="H-InvDB:HIT000031973"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10343 IMAGE:3688901"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..457
/gene="C10orf116"
/gene_synonym="APM2"
/db_xref="GeneID:10974"
/db_xref="HGNC:HGNC:24043"
CDS 46..276
/gene="C10orf116"
/gene_synonym="APM2"
/codon_start=1
/product="chromosome 10 open reading frame 116"
/protein_id="AAH04471.1"
/db_xref="GeneID:10974"
/db_xref="HGNC:HGNC:24043"
/translation="MASKGLQDLKQQVEGTAQEAVSAAGAAAQQVVDQATEAGQKAMD
QLAKTTQETIDKTANQASDTFSGIGKKFGLLK"
BASE COUNT 134 a 139 c 121 g 63 t
ORIGIN
1 cgtcgctcca gctgctcttg acgactccac agataccccg aagccatggc aagcaagggc
61 ttgcaggacc tgaagcaaca ggtggagggg accgcccagg aagccgtgtc agcggccgga
121 gcggcagctc agcaagtggt ggaccaggcc acagaggcgg ggcagaaagc catggaccag
181 ctggccaaga ccacccagga aaccatcgac aagactgcta accaggcctc tgacaccttc
241 tctgggatcg ggaaaaaatt cggcctcctg aaatgacagc agggagactt gggtcggcct
301 cctgaaatga cagcagggag acttgggtga ccccccttcc aggcgccatc tagcacagcc
361 tggccctgat ctccgggcag ccaccacctc ctcggtctgc cccctcatta aaattcacgt
421 tcccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//