LOCUS BC004456 966 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens exoribonuclease 3, mRNA (cDNA clone IMAGE:2819900),
complete cds.
ACCESSION BC004456
VERSION BC004456.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 966)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 966)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: a Column: 9
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..966
/db_xref="H-InvDB:HIT000031960"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2819900"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..966
/gene="ERI3"
/gene_synonym="PINT1"
/db_xref="GeneID:79033"
/db_xref="HGNC:HGNC:17276"
/db_xref="MIM:609917"
CDS 95..481
/gene="ERI3"
/gene_synonym="PINT1"
/codon_start=1
/product="ERI3 protein"
/protein_id="AAH04456.1"
/db_xref="GeneID:79033"
/db_xref="HGNC:HGNC:17276"
/db_xref="MIM:609917"
/translation="MVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVM
LPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGID
DCKNIANIMKTLAYRGFIFKQTSKPF"
BASE COUNT 225 a 288 c 255 g 198 t
ORIGIN
1 ggagattgag tctacctttc acatgtatgt ccagcctgta gtccatccac agcttacccc
61 attctgtaca gagctcaccg ggattattca agccatggtg gatggtcagc caagcctgca
121 gcaagtgctg gagagggtcg atgaatggat ggcgaaggaa ggcctcttag atccaaacgt
181 caagtcaatt tttgtcacct gtggagactg ggacttaaaa gtcatgctcc caggccagtg
241 ccagtacttg ggcttgccag tggcggatta cttcaagcag tggattaatc tgaaaaaggc
301 ttacagcttc gccatgggct gctggcccaa gaatggactt ctagacatga acaagggcct
361 cagcctgcaa cacataggcc ggccccacag cggcattgac gactgcaaga acattgccaa
421 catcatgaag acactcgcct atcgaggctt catcttcaag cagacatcga agccgttctg
481 attggccgag gacaggatgg ggcaggacag ggtagctgtt tggcccagcc cagaatcctc
541 ctctccctca ccagagggga agagggagag tggcatagct ctgtgtccag agtgtcccca
601 gctgccctgt gggctcatgc ccttggcgtg ggcttgtgcc cttgcaaggg cttggccact
661 tggcccttct ggagcagaca ctttgtgccc cccatcccca cccctcaatc tcagcccagt
721 atcagcccct cccattgcgg gcctgggcta gggggaccca ggcactcacc gcctcctccc
781 tggtacacag gcttctgtgg ggccaccaag cccctcctgt gccccctccc atccatagtg
841 catggtgtgt ggtgccccca gggctccagg acagatcagg ccccaccttg tgtctacccc
901 catccccgct gtgaacgtgc cactgaataa agtcggggaa acgagaaaaa aaaaaaaaaa
961 aaaaaa
//