LOCUS BC004429 1114 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2I (UBC9 homolog,
yeast), mRNA (cDNA clone MGC:3835 IMAGE:2819764), complete cds.
ACCESSION BC004429
VERSION BC004429.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1114)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1114)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 35493995.
FEATURES Location/Qualifiers
source 1..1114
/db_xref="H-InvDB:HIT000031935"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3835 IMAGE:2819764"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1114
/gene="UBE2I"
/gene_synonym="C358B7.1"
/gene_synonym="P18"
/gene_synonym="UBC9"
/db_xref="GeneID:7329"
/db_xref="HGNC:HGNC:12485"
/db_xref="MIM:601661"
CDS 63..539
/gene="UBE2I"
/gene_synonym="C358B7.1"
/gene_synonym="P18"
/gene_synonym="UBC9"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2I (UBC9 homolog,
yeast)"
/protein_id="AAH04429.1"
/db_xref="GeneID:7329"
/db_xref="HGNC:HGNC:12485"
/db_xref="MIM:601661"
/translation="MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECA
IPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKD
WRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS"
BASE COUNT 285 a 275 c 268 g 286 t
ORIGIN
1 gctcggtcct ccacctgtcc gctacgctcg ccggggctgc ggccgcccga gggactttga
61 acatgtcggg gatcgccctc agcagactcg cccaggagag gaaagcatgg aggaaagacc
121 acccatttgg tttcgtggct gtcccaacaa aaaatcccga tggcacgatg aacctcatga
181 actgggagtg cgccattcca ggaaagaaag ggactccgtg ggaaggaggc ttgtttaaac
241 tacggatgct tttcaaagat gattatccat cttcgccacc aaaatgtaaa ttcgaaccac
301 cattatttca cccgaatgtg tacccttcgg ggacagtgtg cctgtccatc ttagaggagg
361 acaaggactg gaggccagcc atcacaatca aacagatcct attaggaata caggaacttc
421 taaatgaacc aaatatccaa gacccagctc aagcagaggc ctacacgatt tactgccaaa
481 acagagtgga gtacgagaaa agggtccgag cacaagccaa gaagtttgcg ccctcataag
541 cagcgacctt gtggcatcgt caaaaggaag ggattggttt ggcaagaact tgtttacaac
601 atttttgcaa atctaaagtt gctccataca atgactagtc acctgggggg gttgggcggg
661 cgccatcttc cattgccgcc gcgggtgtgc ggtctcgatt cgctgaattg cccgtttcca
721 tacagggtct cttccttcgg tcttttgtat ttttgattgt tatgtaaaac tcgcttttat
781 tttaatattg atgtcagtat ttcaactgct gtaaaattat aaacttttat acttgggtaa
841 gtcccccagg ggcgagttcc tcgctctggg atgcaggcat gcttctcacc gtgcagagct
901 gcacttggcc tcagctggct gtatggaaat gcaccctccc tcctgccgct cctctctaga
961 accttctaga acctgggctg tgctgctttt gagcctcaga ccccagggca gcatctcggt
1021 tctgcgccac ttcctttgtg tttatatggc gttttgtctg tgttgctgtt tagagtaaat
1081 aaactgttta tataaaaaaa aaaaaaaaaa aaaa
//