LOCUS BC004427 967 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
7, mRNA (cDNA clone MGC:3755 IMAGE:2819923), complete cds.
ACCESSION BC004427
VERSION BC004427.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 967)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 967)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: e Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110945.
FEATURES Location/Qualifiers
source 1..967
/db_xref="H-InvDB:HIT000031933"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3755 IMAGE:2819923"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..967
/gene="PSMA7"
/gene_synonym="C6"
/gene_synonym="HSPC"
/gene_synonym="MGC3755"
/gene_synonym="RC6-1"
/gene_synonym="XAPC7"
/db_xref="GeneID:5688"
/db_xref="HGNC:HGNC:9536"
/db_xref="MIM:606607"
CDS 74..820
/gene="PSMA7"
/gene_synonym="C6"
/gene_synonym="HSPC"
/gene_synonym="MGC3755"
/gene_synonym="RC6-1"
/gene_synonym="XAPC7"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 7"
/protein_id="AAH04427.1"
/db_xref="GeneID:5688"
/db_xref="HGNC:HGNC:9536"
/db_xref="MIM:606607"
/translation="MSYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLG
VEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPV
TVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANA
IGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQSLK
ILNPEEIEKYVAEIEKEKEENEKKKQKKAS"
BASE COUNT 267 a 225 c 263 g 212 t
ORIGIN
1 gcgggtgcgc gcaggccgtg agtgtgcgct tttgagagtc gcggcggaag gagcccggcc
61 gccgcccgcc ggcatgagct acgaccgcgc catcaccgtc ttctcgcccg acggccacct
121 cttccaagtg gagtacgcgc aggaggccgt caagaagggc tcgaccgcgg ttggtgttcg
181 aggaagagac attgttgttc ttggtgtgga gaagaagtca gtggccaaac tgcaggatga
241 aagaacagtg cggaagatct gtgctttgga tgacaacgtc tgcatggcct ttgcaggcct
301 caccgccgat gcaaggatag tcatcaacag ggcccgggtg gagtgccaga gccaccggct
361 gactgtggag gacccggtca ctgtggagta catcacccgc tacatcgcca gtctgaagca
421 gcgttatacg cagagcaatg ggcgcaggcc gtttggcatc tctgccctca tcgtgggttt
481 cgactttgat ggcactccta ggctctatca gactgacccc tcgggcacat accatgcctg
541 gaaggccaat gccataggcc ggggtgccaa gtcagtgcgt gagttcctgg agaagaacta
601 tactgacgaa gccattgaaa cagatgatct gaccattaag ctggtgatca aggcactcct
661 ggaagtggtt cagtcaggtg gcaaaaacat tgaacttgct gtcatgaggc gagatcaatc
721 cctcaagatt ttaaatcctg aagaaattga gaagtatgtt gctgaaattg aaaaagaaaa
781 agaagaaaac gaaaagaaga aacaaaagaa agcatcatga tgaataaaat gtctttgctt
841 gtaattttta aattcatatc aatcatggat gagtctcgat gtgtaggcct ttccattcca
901 tttattcaca ctgagtgtcc tacaataaac ttccgtattt ttaacctgaa aaaaaaaaaa
961 aaaaaaa
//