LOCUS BC004423 1720 bp mRNA linear HUM 29-OCT-2007
DEFINITION Homo sapiens canopy 3 homolog (zebrafish), mRNA (cDNA clone
MGC:3530 IMAGE:2819660), complete cds.
ACCESSION BC004423
VERSION BC004423.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1720)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1720)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33942071.
FEATURES Location/Qualifiers
source 1..1720
/db_xref="H-InvDB:HIT000031929"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3530 IMAGE:2819660"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1720
/gene="CNPY3"
/gene_synonym="CAG4A"
/gene_synonym="ERDA5"
/gene_synonym="PRAT4A"
/db_xref="GeneID:10695"
/db_xref="HGNC:HGNC:11968"
/db_xref="MIM:610774"
CDS 388..1224
/gene="CNPY3"
/gene_synonym="CAG4A"
/gene_synonym="ERDA5"
/gene_synonym="PRAT4A"
/codon_start=1
/product="canopy 3 homolog (zebrafish)"
/protein_id="AAH04423.1"
/db_xref="GeneID:10695"
/db_xref="HGNC:HGNC:11968"
/db_xref="MIM:610774"
/translation="MDSMPEPASRCLLLLPLLLLLLLLLPAPELGPSQAGAEENDWVR
LPSKCEVCKYVAVELKSAFEETGKTKEVIGTGYGILDQKASGVKYTKSDLRLIEVTET
ICKRLLDYSLHKERTGSNRFAKGMSETFETLHNLVHKGVKVVMDIPYELWNETSAEVA
DLKKQCDVLVEEFEEVIEDWYRNHQEEDLTEFLCANHVLKGKDTSCLAEQWSGKKGDT
AALGGKKSKKKSSRAKAAGGRSSSSKQRKELGGLEGDPSPEEDEGIQKASPLTHSPPD
EL"
BASE COUNT 389 a 491 c 526 g 314 t
ORIGIN
1 cccaggccca gacgcaggct tcttctcctc gggtcttggt cctgcatcct ctctctccca
61 gagcctccgt tagggggtgg gaaaggactt tgccataggt cgctgaggcc accatctgct
121 ctcttactgg ccaagggcgt aaaaagatag tcctcccatt agctagagag caaaccccag
181 aaagcctatt ggctgcgccg tccgcgggcc ttggtccgct ttgaaggcgg gctgcggctg
241 cgagaggagg gcgggcggga ggctagctgt tgtcgtggtt gctcggaggc acgtgtgcag
301 tcccggaagc ggcgagggga aactgctccg cgcgcgccgc gggaggagga accgcccggt
361 cctttagggt ccgggcccgg ccgggccatg gattcaatgc ctgagcccgc gtcccgctgt
421 cttctgcttc ttcccttgct gctgctgctg ctgctgctgc tgccggcccc ggagctgggc
481 ccgagccagg ccggagctga ggagaacgac tgggttcgcc tgcccagcaa atgcgaagtg
541 tgtaaatatg ttgctgtgga gctgaagtca gcctttgagg aaaccggcaa gaccaaggag
601 gtgattggca cgggctatgg catcctggac cagaaggcct ctggagtcaa atacaccaag
661 tcggacttgc ggttaatcga agtcactgag accatttgca agaggctcct ggattatagc
721 ctgcacaagg agaggaccgg cagcaatcga tttgccaagg gcatgtcaga gacctttgag
781 acattacaca acctggtaca caaaggggtc aaggtggtga tggacatccc ctatgagctg
841 tggaacgaga cttctgcaga ggtggctgac ctcaagaagc agtgtgatgt gctggtggaa
901 gagtttgagg aggtgatcga ggactggtac aggaaccacc aggaggaaga cctgactgaa
961 ttcctctgcg ccaaccacgt gctgaaggga aaagacacca gttgcctggc agagcagtgg
1021 tccggcaaga agggagacac agctgccctg ggagggaaga agtccaagaa gaagagcagc
1081 agggccaagg cagcaggcgg caggagtagc agcagcaaac aaaggaagga gctgggtggc
1141 cttgagggag accccagccc cgaggaggat gagggcatcc agaaggcatc ccctctcaca
1201 cacagccccc ctgatgagct ctgagcccac ccagcatcct ctgtcctgag acccctgatt
1261 ttgaagctga ggagtcaggg gcatggctct ggcaggccgg gatggccccg cagccttcag
1321 cccctccttg ccttggctgt gccctcttct gccaaggaaa gacacaagcc ccaggaagaa
1381 ctcagagccg tcatgggtag cccacgccgt cctttcccct ccccaagtgt ttctctcctg
1441 acccagggtt caggcaggcc ttgtggtttc aggactgcaa ggactccagt gtgaactcag
1501 gaggggcagg tgtcagaact gggcaccagg actggagccc cctccggaga ccaaactcac
1561 catccctcag tcctccccaa cagggtacta ggactgcagc cccctgtagc tcctctctgc
1621 ttacccctcc tgtggacacc ttgcactctg cctggccctt cccagagccc aaagagtaaa
1681 aatgttctgg ttctgaaaaa aaaaaaaaaa aaaaaaaaaa
//