LOCUS BC004418 1721 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens synaptosomal-associated protein, 47kDa, mRNA (cDNA clone IMAGE:3659680), partial cds. ACCESSION BC004418 VERSION BC004418.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1721) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1721) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: b Column: 24. FEATURES Location/Qualifiers source 1..1721 /db_xref="H-InvDB:HIT000086363" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3659680" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_9" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1721 /gene="SNAP47" /gene_synonym="HEL170" /gene_synonym="SNAP-47" /gene_synonym="SVAP1" /db_xref="GeneID:116841" /db_xref="HGNC:HGNC:30669" CDS <1..1139 /gene="SNAP47" /gene_synonym="HEL170" /gene_synonym="SNAP-47" /gene_synonym="SVAP1" /codon_start=3 /product="SNAP47 protein" /protein_id="AAH04418.1" /db_xref="GeneID:116841" /db_xref="HGNC:HGNC:30669" /translation="GEILVSFPLSSIVEIKKEASHFIFSSITILEKGHAKHWFSSLRP SRNVVFSIIEHFWRELLLSQPGAVADASVPRTRGEELTGLMAGSQKRLEDTARVLHHQ GQQLDSVMRGLDKMESDLEVADRLLTELESPAWWPFSSKLWKTPPETKPREDVSMTSC EPFGKEGILIKIPAVISHRTESHVKPGRLTVLVSGLEIHDSSSLLMHRFEREDVDDIK VHSPYEISIRQRFIGKPDMAYRLISAKMPEVIPILEVQFSKKMELLEDALVLRSARTS SPAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTSLPALSEADTQELTQILRR MKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMKRLT" BASE COUNT 426 a 457 c 480 g 358 t ORIGIN 1 ctggagagat tctggtcagc ttccccctct ccagcatagt tgagatcaag aaggaggctt 61 cacattttat cttcagctcc atcaccatcc tggagaaggg ccatgccaag cactggttca 121 gctccctgcg gccaagtcga aatgtggtct tcagcatcat cgagcatttc tggagggagc 181 tgctgctgtc tcagcctgga gccgtggcag acgcatctgt cccaaggacc cggggcgagg 241 agctgacggg actcatggct ggatcccaga aacgcctgga ggacacggcg agggtcctgc 301 accaccaggg ccagcagctg gacagcgtca tgagaggcct ggacaagatg gagtcagacc 361 tggaggtggc ggacagattg ctgacagaac tggaatctcc tgcttggtgg ccctttagct 421 ccaagctttg gaagacacca ccggaaacaa agcccaggga agatgtctcc atgaccagtt 481 gtgaaccctt tgggaaagaa gggatactga taaaaattcc tgctgttatt tcccacagaa 541 cagagtctca cgttaaacca gggaggctca ccgtccttgt gtctgggttg gaaatacatg 601 actccagttc tttgctcatg cacaggtttg aaagagaaga cgtggacgac atcaaggtcc 661 actcacctta cgaaattagc atccgccagc ggtttattgg aaagccagac atggcctatc 721 gtttgatatc tgccaagatg ccagaggtta tccccatttt agaagtgcag ttcagcaaga 781 agatggagct gttagaagat gcattggtgc tcagaagcgc aagaacctct tcccccgcag 841 agaagagctg ctcagtctgg catgcagcat ctgggctgat gggccgtacc ctgcaccgtg 901 agccacccgc aggagaccag gagggcacag cactgcacct gcagacaagc ctgccagccc 961 tttctgaggc agatacccag gaactaaccc agatcctgag gaggatgaag gggctggccc 1021 tggaggccga gagtgagctg gagagacaag acgaagccct ggatggcgtt gcagcagctg 1081 tggacagggc aaccttgacc atcgacaagc acaacaggcg gatgaagagg ctgacctagg 1141 ggcagaacgt ccctgcattc ctgtctcacc ctgcacatcc cgctgagatg gagggctggg 1201 cggcagtgcc agggctgcag aggcctgtgg ccctccggag tggtcttcct ctggatgggg 1261 ctgctactgt ggggctgctt ctgcaccagg ggcctcccca ggtgtgcacc atgcctgcct 1321 cccacttggc tgtccctgct gctgggcagg acccggccac atgttctgcg gatgctgcag 1381 aagtgtggac catggcggga ccccaaggac acttggcaca ggcctggaag aggccgccct 1441 cgtcttgtct cggctccctt tcatggacag actggccttc ttagctgtac tataaatttg 1501 tgagtgaagt tagagcccag ctcacttagc cagctcactt tgagggcatc ctataaacac 1561 ccaactgttc ttttatcgtc tcggttttag ccaaaagtga aattagcatg actgcatctt 1621 tcaaacaaaa atattgattt ctgcttttag ggccccgttt ccatccagaa ataaagggaa 1681 atgctggctt caaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //