LOCUS BC004411 2213 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens zinc finger, C4H2 domain containing, mRNA (cDNA clone
MGC:11005 IMAGE:3639978), complete cds.
ACCESSION BC004411
VERSION BC004411.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2213)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2213)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: b Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923719.
FEATURES Location/Qualifiers
source 1..2213
/db_xref="H-InvDB:HIT000031924"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:11005 IMAGE:3639978"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2213
/gene="ZC4H2"
/gene_synonym="HCA127"
/db_xref="GeneID:55906"
/db_xref="HGNC:HGNC:24931"
CDS 108..782
/gene="ZC4H2"
/gene_synonym="HCA127"
/codon_start=1
/product="zinc finger, C4H2 domain containing"
/protein_id="AAH04411.1"
/db_xref="GeneID:55906"
/db_xref="HGNC:HGNC:24931"
/translation="MADEQEIMCKLESIKEIRNKTLQMEKIKARLKAEFEALESEERH
LKEYKQEMDLLLQEKMAHVEELRLIHADINVMENTIKQSENDLNKLLESTRRLHDEYK
PLKEHVDALRMTLGLQRLPDLCEEEEKLSLDYFEKQKAEWQTEPQEPPIPESLAAAAA
AAQQLQVARKQDTRQTATFRQQPPPMKACLSCHQQIHRNAPICPLCKAKSRSRNPKKP
KRKQDE"
BASE COUNT 594 a 524 c 527 g 568 t
ORIGIN
1 caggctcata gccccaagcc cggaggaggt ggctacattg tgtctattgt atcccttggc
61 tggtgtattt gtacatctct cgggacgtga aattgacagt gaaaagtatg gcagatgagc
121 aagaaatcat gtgcaaattg gaaagcatta aagagatcag gaacaagacc ctgcagatgg
181 agaagatcaa ggctcgtttg aaggctgagt ttgaggcact tgagtcagag gaaaggcacc
241 tgaaggaata caagcaggag atggaccttc tgctacagga gaagatggcc catgtggagg
301 aactccgact gatccacgct gacatcaatg tgatggaaaa cactatcaaa caatctgaga
361 atgacctaaa caagctgcta gagtctacaa ggaggctgca tgatgagtat aagccactga
421 aagaacatgt ggatgccctg cgcatgactc tgggcctgca gaggctccct gacttgtgtg
481 aagaagagga gaagctttcc ttggattact ttgagaagca gaaagcagaa tggcagacag
541 aacctcagga gccccccatc cctgagtccc tggccgctgc agccgctgcc gcccaacagc
601 tccaagtggc taggaagcag gatactcggc agacggccac cttcaggcag cagcccccac
661 ctatgaaggc ctgcttgtca tgtcaccagc aaattcaccg gaatgcacct atatgccctc
721 tttgcaaggc caagagtcgg tcccggaacc ccaaaaagcc gaaacggaag caggatgaat
781 aaagaaaggg agagcacatg aagctttgct aattataacc cctcaccttg accagagtca
841 ttgatgtcct gatgtgaaac aacccttgcc caaccccacg aagtctccta tttaatgtga
901 tggaagcaca acccctctct cactttgctc ctatttcttt ctgctcttgg gatttctggt
961 ttaggaagag atgtggttca ggtgctaaac agtgtgtctg atgatccctt ctctcccact
1021 cacatttcaa cccctgccct tgtttggagc taagggaagg gcaaaaggct cagatatgat
1081 tctctatctc ttgtgcctga ggcctggagc ctaaggagct gtagggtctg aggggcaggg
1141 gaggcccata tcttgtttca ggtaaaggac ccagtatttc ccctccttgt acttttgcct
1201 taggttctca agggacaata gtcttcatgt tggattctcc aacaggctgg gtgcatgtat
1261 ccccctactc ctaccctcat ctcatcctta aggcccagag gtagcttgga caagccctcc
1321 ttttcataat catttgggag gcatggctgt aattctttag ctttctccac ttctgtctcc
1381 cacatatact aaaattctta ggtactaggc tgtgtgtctt gggatcttaa gatcaatgaa
1441 cctttcccca atatctagtc tttgcaaatt ctagtagaag atttccacag tgaaatcagt
1501 gagccagacc aactctacat ctcctgccta acctactgcc taagtcatta gggctgaggg
1561 ctcggctgta ggggcttcct taggctgaga gtgcccccag gctgacatct gtgttggctt
1621 ttgttcagaa ccattactct ggcacatgct caatggtata ttgcagggag gagaggagta
1681 gatttagatt tgagtaaatg ccaatcactt tacacatgaa ggtgggtggg actttccttc
1741 cattcatccc ttgctctctt ggatctgaac tcttctggag cctcagctca ggatagctgc
1801 tggccactcc tgtcctgtgg attgtgcagg tggcctttcc tcccaaaaga aaaggcatca
1861 ggctccccaa gccccacagc tctcctttcc accaaagcca ggtttcctgg taaggtcact
1921 cgaagataag ggatggggat gggggctgac tgacaaaaaa ttttagcccc aggtctcagt
1981 acctggctgg ggagggggat atttttcctt ccttaagtag ttttacattg ccacagtgtg
2041 tatgtgttca ctatataaaa tgttcctctg ctctttgaaa gtaagagtgt tgtgtctgta
2101 caaatccttt taacatgcat tcattggagt aaattctgag tatctactgt gtattggata
2161 atacaaaaga tgtaatgtca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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