LOCUS BC004409 1405 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens mitochondrial GTPase 1 homolog (S. cerevisiae), mRNA
(cDNA clone IMAGE:3638994), partial cds.
ACCESSION BC004409
VERSION BC004409.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1405)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1405)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1405
/db_xref="H-InvDB:HIT000086357"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3638994"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1405
/gene="MTG1"
/gene_synonym="GTP"
/gene_synonym="RP11-108K14.2"
/db_xref="GeneID:92170"
/db_xref="HGNC:HGNC:32159"
/db_xref="IMGT/GENE-DB:32159"
/db_xref="MIM:32159"
CDS <1..1068
/gene="MTG1"
/gene_synonym="GTP"
/gene_synonym="RP11-108K14.2"
/codon_start=1
/product="MTG1 protein"
/protein_id="AAH04409.1"
/db_xref="GeneID:92170"
/db_xref="HGNC:HGNC:32159"
/db_xref="IMGT/GENE-DB:32159"
/db_xref="MIM:32159"
/translation="NSAEGGAEEVSCGSVSGDGAAMRLTPRALCSAAQAAWRENFPLC
GRDVARWFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLV
LNKMDLADLTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRK
ENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPL
MFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLNKHQRFGYVQH
YGLGSACDNVERVLKSVAVKLGKTQKVKVLTGTGNVNVIQPNYPAAARDFLQTFRRGL
LGSVMLDLDVLRGHPPAETLP"
BASE COUNT 308 a 393 c 432 g 272 t
ORIGIN
1 aattcggccg agggcggcgc agaggaggtc agctgcggga gcgtttccgg ggacggtgcc
61 gccatgagat tgaccccgcg cgcgctgtgc agcgccgccc aggccgcctg gcgggagaac
121 ttccccctgt gcggtcgcga cgtggcgcgc tggttcccgg gccacatggc caaggggctg
181 aagaagatgc agagcagcct gaagctggtg gactgtatca tcgaggtcca cgatgcccgg
241 atcccacttt caggccgcaa ccctctgttt caggaaaccc ttgggcttaa gcctcacttg
301 ctggtcctca acaagatgga cttggcggat cttacagagc agcagaaaat tatgcaacac
361 ttagaaggag aaggcctaaa aaatgtcatt tttaccaact gtgtaaagga tgaaaatgtc
421 aagcagatca tcccgatggt cactgaactg attgggagaa gccaccgcta ccaccgaaaa
481 gagaacctgg agtactgtat catggtcatt ggggtcccca acgtgggcaa gtcctccctc
541 atcaactccc tccggaggca gcacctcagg aaagggaaag ccaccagggt gggtggcgag
601 cctgggatca ccagagctgt gatgtccaaa attcaggtct ctgagcggcc cctgatgttc
661 ctgttggaca ctcctggcgt gctggctcct cggattgaaa gtgtggagac aggcctgaag
721 ctggccctgt gtggaacggt gctggaccac ctggtcgggg aggagaccat ggctgactac
781 ctgctgtaca ccctcaacaa acaccagcgc tttgggtacg tgcagcacta cggcctgggc
841 agtgcctgtg acaacgtaga gcgcgtgctg aagagtgtgg ctgtgaagct ggggaagacg
901 cagaaggtga aggtgctcac gggcacgggt aacgtgaacg ttattcagcc taactatcct
961 gcggcagccc gtgacttcct gcagactttc cgccgtgggc tgctgggttc cgtgatgctg
1021 gacctcgacg tcctgcgggg ccaccccccg gctgagactt tgccctgaac ttgtccgggt
1081 agggagggcc ggaggcatgt ggcctcccag acctcctgac ctgggtggtt gaggctcaag
1141 acagctcacc cggtccagaa gctccatgct ggtcactagg gtgctgtgct ctctggcgcc
1201 ccacagcctg gccagctcca gggaccccag ttgcagggcc caagcaggtg ggagtggaca
1261 ccaggcttcc cagtggacgt ccctgagcag ctccgcatgc ttggttctcc cggagcttcc
1321 tgctcaggcc tcttgagaaa tggatgctgt ctcagaagga gttaaagcta taacctgtaa
1381 cctttaaaaa aaaaaaaaaa aaaaa
//