LOCUS BC004400 1305 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens LIM domain containing 2, mRNA (cDNA clone MGC:10986
IMAGE:3636469), complete cds.
ACCESSION BC004400
VERSION BC004400.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1305)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1305)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: b Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22095372.
FEATURES Location/Qualifiers
source 1..1305
/db_xref="H-InvDB:HIT000031916"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10986 IMAGE:3636469"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1305
/gene="LIMD2"
/gene_synonym="MGC10986"
/db_xref="GeneID:80774"
/db_xref="HGNC:HGNC:28142"
CDS 160..543
/gene="LIMD2"
/gene_synonym="MGC10986"
/codon_start=1
/product="LIM domain containing 2"
/protein_id="AAH04400.1"
/db_xref="GeneID:80774"
/db_xref="HGNC:HGNC:28142"
/translation="MFQAAGAAQATPSHDAKGGGSSTVQRSKSFSLRAQVKETCAACQ
KTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNY
DEGFGRKQHKELWAHKEVDPGTKTA"
BASE COUNT 253 a 456 c 381 g 215 t
ORIGIN
1 cggcggtggc tcggggtcca ctggtagcgg cagcagctcg cgcccgcgcc ctcctcgtac
61 ccgtgcgccc ccggagaccg atcccgcccc gcggcccagg ccgggcctga acccagcggg
121 tgccgcttct ccacccgagg cttccacctc caacgagcca tgttccaggc tgcaggagcc
181 gcccaggcca ccccctctca tgacgccaaa ggcggcggca gcagcacggt gcagcgctcc
241 aagtccttca gcctgcgggc ccaggtgaag gagacctgcg ccgcctgcca gaagaccgtg
301 taccccatgg agcggctggt ggccgacaag ctcattttcc acaactcttg cttctgctgc
361 aagcactgtc acaccaagct cagcctgggc agctacgccg cgctgcacgg ggagttctac
421 tgcaaacccc acttccagca gctgtttaag agcaaaggca actacgacga ggggtttggc
481 cgcaagcagc acaaggagct ctgggcccac aaggaggtgg accccggcac caagacggcc
541 tgaggcctct gtaaccttcc accccctctg cggaaggcct ggagccggca gggggaaggt
601 gggaaggagg tcgagctggg cttgcgtggg ggccaggtgg gaaggggatg aggcttgctc
661 aggcgtaggg gaccagggca gggctctgct ccaggactcc ttccttcttc cttctcccgc
721 agccggtgag ggtttggaaa ccaggattgg ggtctgccca ccaccctgct tcctgcttcg
781 ttcagcctcc ctccccacct caccccagga ccccctggga ggcccccaag cccagctccc
841 ctatctaggt gccttttctc cagcaaggag tcagcatgcc cccctcaggg tcccaagctc
901 cctcactgcc accggagact gtgtggcccc cacgtctccc catctacctc tacccttaac
961 ctgtttctga gccacggaga cagggaggaa ggagcgcgac agtgccacct gttgggcatc
1021 ataaatgccc ctgcagccca tgggggagga gatggggaag tggagccacc ctgcctctgc
1081 agggcaaggc agggcctgcc ccagtggggc ttgggaccat ctcgaaccac cagcgtggag
1141 aagcagaagc aaaagcactc gccaggctgc agcctcaggc actggcaggg gctggtgcgg
1201 ccccactccc ctcccccgct cccatttgtg cccatcctgt tgtgaccaac cccgttttaa
1261 acatgtttca atagatccag attctctaaa aaaaaaaaaa aaaaa
//