LOCUS BC004385 1313 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens secretory carrier membrane protein 2, mRNA (cDNA clone
MGC:10855 IMAGE:3617954), complete cds.
ACCESSION BC004385
VERSION BC004385.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1313)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1313)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16445417.
FEATURES Location/Qualifiers
source 1..1313
/db_xref="H-InvDB:HIT000031909"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10855 IMAGE:3617954"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1313
/gene="SCAMP2"
/db_xref="GeneID:10066"
/db_xref="HGNC:HGNC:10564"
/db_xref="MIM:606912"
CDS 75..1064
/gene="SCAMP2"
/codon_start=1
/product="secretory carrier membrane protein 2"
/protein_id="AAH04385.1"
/db_xref="GeneID:10066"
/db_xref="HGNC:HGNC:10564"
/db_xref="MIM:606912"
/translation="MSAFDTNPFADPVDVNPFQDPSVTQLTNAPQGGLAEFNPFSETN
AATTVPVTQLPGSSQPAVLQPSVEPTQPTPQAVVSAAQAGLLRQQEELDRKAAELERK
ERELQNTVANLHVRQNNWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHS
VTLFLNLLACLAWFSGNSSKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSF
FVFFFVFFCQIGIYIIQLVGIPGLGDSGWIAALSTLDNHSLAISVIMMVVAGFFTLCA
VLSVFLLQRVHSLYRRTGASFQQAQEEFSQGIFSSRTFHRAASSAAQGAFQGN"
BASE COUNT 255 a 418 c 324 g 316 t
ORIGIN
1 cacgaagcgc cgctgggtct gggtgcccgg aggcagcagc gttcgcggag ttcgcccgct
61 ggcccccgat caccatgtcg gctttcgaca ccaacccctt cgcggaccca gtggatgtaa
121 accccttcca ggatccctct gtgacccagc tgaccaacgc cccgcagggc ggcctggcgg
181 aattcaaccc cttctcagag acaaatgcag cgacaacagt tcctgtcacc caactccctg
241 ggtcctcaca gccagcggtt ctccagccat cagtggaacc aacccagccg accccccagg
301 ccgtggtgtc tgcagcccag gcaggcctgc tccggcagca ggaagaactg gacaggaaag
361 ctgccgagct ggaacgcaag gagcgggagc tgcagaacac tgtagccaac ttgcatgtga
421 gacagaacaa ctggccccct ctgccctcgt ggtgccctgt gaagccctgc ttctatcagg
481 atttctccac agagatccct gccgactacc agcggatatg caagatgctc tactatctgt
541 ggatgttgca ttcagtgact ctgtttctga acctgcttgc ctgcctggcc tggttctcgg
601 gcaacagctc caagggagtg gactttggcc tctccatcct gtggtttctg atcttcactc
661 cctgtgcctt cctttgttgg taccgaccca tctataaggc ctttaggtcc gacaactctt
721 tcagcttctt tgtgttcttc tttgtatttt tttgtcaaat agggatctac atcatccagt
781 tggttggcat ccctggcctg ggggacagcg gttggattgc agccctgtct acactggata
841 atcattccct ggccatatca gtcatcatga tggtggtggc tggcttcttc accctctgtg
901 ccgtgctctc agtcttcctc ctgcagcggg tgcactccct ctaccgacgg acaggggcca
961 gcttccagca ggcccaggag gagttttccc agggcatctt cagcagcaga accttccaca
1021 gagctgcttc atctgctgcc caaggagcct tccaggggaa ttagtcctcc tctcttctct
1081 ccccctcagc ctttctctcg cctgccttct gagctgcact ttccgtgggt gccttatgtg
1141 gtggtggttg tgcccagcac agacctggca gggttcttgc cgtggctctt cctcctccct
1201 cagcgaccag ctctccctgg aacgggaggg acagggaatt ttttccccct ctatgtacaa
1261 aaaaaaacaa agctctcttt ccttctctgg taaaaaaaaa aaaaaaaaaa aaa
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