LOCUS BC004383 3057 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens polypyrimidine tract binding protein 1, mRNA (cDNA clone MGC:10830 IMAGE:3615251), complete cds. ACCESSION BC004383 VERSION BC004383.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3057) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3057) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: l Column: 5. FEATURES Location/Qualifiers source 1..3057 /db_xref="H-InvDB:HIT000031907" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10830 IMAGE:3615251" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3057 /gene="PTBP1" /gene_synonym="HNRNPI" /gene_synonym="HNRPI" /gene_synonym="MGC10830" /gene_synonym="MGC8461" /gene_synonym="pPTB" /gene_synonym="PTB-1" /gene_synonym="PTB-T" /gene_synonym="PTB2" /gene_synonym="PTB3" /gene_synonym="PTB4" /db_xref="GeneID:5725" /db_xref="HGNC:HGNC:9583" /db_xref="MIM:600693" CDS 17..1612 /gene="PTBP1" /gene_synonym="HNRNPI" /gene_synonym="HNRPI" /gene_synonym="MGC10830" /gene_synonym="MGC8461" /gene_synonym="pPTB" /gene_synonym="PTB-1" /gene_synonym="PTB-T" /gene_synonym="PTB2" /gene_synonym="PTB3" /gene_synonym="PTB4" /codon_start=1 /product="polypyrimidine tract binding protein 1" /protein_id="AAH04383.1" /db_xref="GeneID:5725" /db_xref="HGNC:HGNC:9583" /db_xref="MIM:600693" /translation="MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDS KKFKGDSRSAGVPSRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMN TEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSG NLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTK NNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT RPDLPSGDSQPSLDQTMAAAFGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGA GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMS HLNGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIF PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQAL IDLHNHDLGENHHLRVSFSKSTI" BASE COUNT 688 a 935 c 803 g 631 t ORIGIN 1 gtctgctctg tgtgccatgg acggcattgt cccagatata gccgttggta caaagcgggg 61 atctgacgag cttttctcta cttgtgtcac taacggaccg tttatcatga gcagcaactc 121 ggcttctgca gcaaacggaa atgacagcaa gaagttcaaa ggtgacagcc gaagtgcagg 181 cgtcccctct agagtgatcc acatccggaa gctccccatc gacgtcacgg agggggaagt 241 catctccctg gggctgccct ttgggaaggt caccaacctc ctgatgctga aggggaaaaa 301 ccaggccttc atcgagatga acacggagga ggctgccaac accatggtga actactacac 361 ctcggtgacc cctgtgctgc gcggccagcc catctacatc cagttctcca accacaagga 421 gctgaagacc gacagctctc ccaaccaggc gcgggcccag gcggccctgc aggcggtgaa 481 ctcggtccag tcggggaacc tggccttggc tgcctcggcg gcggccgtgg acgcagggat 541 ggcgatggcc gggcagagcc ccgtgctcag gatcatcgtg gagaacctct tctaccctgt 601 gaccctggat gtgctgcacc agattttctc caagttcggc acagtgttga agatcatcac 661 cttcaccaag aacaaccagt tccaggccct gctgcagtat gcggaccccg tgagcgccca 721 gcacgccaag ctgtcgctgg acgggcagaa catctacaac gcctgctgca cgctgcgcat 781 cgacttttcc aagctcacca gcctcaacgt caagtacaac aatgacaaga gccgtgacta 841 cacacgccca gacctgcctt ccggggacag ccagccctcg ctggaccaga ccatggccgc 901 ggccttcggc ctttccgttc cgaacgtcca cggcgccctg gcccccctgg ccatcccctc 961 ggcggcggcg gcagctgcgg cggcaggtcg gatcgccatc ccgggcctgg cgggggcagg 1021 aaattctgta ttgctggtca gcaacctcaa cccagagaga gtcacacccc aaagcctctt 1081 tattcttttc ggcgtctacg gtgacgtgca gcgcgtgaag atcctgttca ataagaagga 1141 gaacgcccta gtgcagatgg cggacggcaa ccaggcccag ctggccatga gccacctgaa 1201 cgggcacaag ctgcacggga agcccatccg catcacgctc tcgaagcacc agaacgtgca 1261 gctgccccgc gagggccagg aggaccaggg cctgaccaag gactacggca actcacccct 1321 gcaccgcttc aagaagccgg gctccaagaa cttccagaac atattcccgc cctcggccac 1381 gctgcacctc tccaacatcc cgccctcagt ctccgaggag gatctcaagg tcctgttttc 1441 cagcaatggg ggcgtcgtca aaggattcaa gttcttccag aaggaccgca agatggcact 1501 gatccagatg ggctccgtgg aggaggcggt ccaggccctc attgacctgc acaaccacga 1561 cctcggggag aaccaccacc tgcgggtctc cttctccaag tccaccatct aggggcacag 1621 gcccccacgg ccgggccccc tggcgacaac ttccatcatt ccagagaaaa gccactttaa 1681 aaacagctga agtgacctag cagaccagag attttatttt tttaaagaga aatcagttta 1741 cctgttttta aaaaaattaa atctagttca ccttgctcac cctgcggtga cagggacagc 1801 tcaggctctt ggtgactgtg gcagcgggag ttcccggccc tccacacccg gggccagacc 1861 ctcggggcca tgccttggtg gggcctgtgt cgggcgtggg gcctgcaggt gggcgccccg 1921 accacgactt ggcttccttg tgccttaaaa aacctgcctt cctgcagcca cacacccacc 1981 cggggtgtcc tggggaccca aggggtgggg gggtcacacc agagagaggc agggggcctg 2041 gccggctcct gcaggatcat gcagctgggg cgcggcggcc gcggctgcga caccccaacc 2101 ccagccctct aatcaagtca cgtgattctc ccttcacccc gcccccaggg ccttcccttc 2161 tgcccccagg cgggctcccc gctgctccag ctgcggagct ggtcgacata atctctgtat 2221 tatatacttt gcagttgcag acgtctgtgc ctagcaatat ttccagttga ccaaatattc 2281 taatcttttt tcatttatat gcaaaagaaa tagttttaag taacttttta tagcaagatg 2341 atacaatggt atgagtgtaa tctaaacttc cttgtggtat taccttgtat gctgttactt 2401 ttattttatt ccttgtaatt aagtcacagg caggacccag tttccagaga gcaggcgggg 2461 ccgcccagtg ggtcaggcac agggagcccc ggtcctatct tagagcccct gagcttcagg 2521 gaaggggcgg gcgtgtcgcc gcctctggca tcgcctccgg ttgccttaca ccacgccttc 2581 acctgcagtc gcctagaaaa cttgctctca aacttcaggg ttttttcttc cttcaaattt 2641 tggaccaaag tctcatttct gtgttttgcc tgcctctgat gctgggaccc ggaaggcggg 2701 cgctcctcct gtcttctctg tgctctttct accgcccccg cgtcctgtcc cgggggctct 2761 cctaggatcc cctttccgta aaagcgtgta acaagggtgt aaatatttat aattttttat 2821 acctgttgtg agacccgagg ggcggcggcg cggtttttta tggtgacaca aatgtatatt 2881 ttgctaacag caattccagg ctcagtattg tgaccgcgga gccacagggg accccacgca 2941 cattccgttg ccttacccga tggcttgtga cgcggagaga accgattaaa accgtttgag 3001 aaactccaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaac //