LOCUS BC004381 1888 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens lipolysis stimulated lipoprotein receptor, mRNA (cDNA
clone IMAGE:3641235), partial cds.
ACCESSION BC004381
VERSION BC004381.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1888)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1888)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: l Column: 20.
FEATURES Location/Qualifiers
source 1..1888
/db_xref="H-InvDB:HIT000031906"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3641235"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1888
/gene="LSR"
/gene_synonym="LISCH7"
/db_xref="GeneID:51599"
/db_xref="HGNC:HGNC:29572"
CDS <1..1767
/gene="LSR"
/gene_synonym="LISCH7"
/codon_start=1
/product="LSR protein"
/protein_id="AAH04381.2"
/db_xref="GeneID:51599"
/db_xref="HGNC:HGNC:29572"
/translation="AQTAAMALLAGGLSRGLGSHPAAAGRDAVVFVWLLLSTWCTAPA
RAIQVTVSNPYHVVILFQPVTLPCTYQMTSTPTQPIVIWKYKSFCRDRIADAFSPASV
DNQLNAQLAAGNPGYNPYVECQDSVRTVRVVATKQGNAVTLGDYYQGRRITITGNADL
TFDQTAWGDSGVYYCSVVSAQDLQGNNEAYAELIVLDWLFVVVVCLAAFLIFLLLGIC
WCQCCPHTCCCYVRCPCCPDKCCCPEALYAAGKAATSGVPSIYAPSTYAHLSPAKTPP
PPAMIPMGPAYNGYPGGYPGDVDRSSSAGGQGSYVPLLRDTDSSVASEVRSGYRIQAS
QQDDSMRVLYYMEKELANFDPSRPGPPSGRVERAMSEVTSLHEDDWRSRPSRGPALTP
IRDEEWGGHSPRSPRGWDQEPAREQAGGGWRARRPRARSVDALDDLTPPSTAESGSRS
PTSNGGRRSRAYMPPRSRSRDDLYDQDDSRDFPRSRDPHYDDFRSRERPPADPRSHHH
RTRDPRDNGSRSGDLPYDGRLLEEAVRKKGSEERRRPHKEEEEEAYYPPAPPPYSETD
SQASRERRLKKNLALSRESLVV"
BASE COUNT 363 a 643 c 558 g 324 t
ORIGIN
1 gcccagacgg ccgcgatggc gctgttggcc ggcgggctct ccagagggct gggctcccac
61 ccggccgccg caggccggga cgcggtcgtc ttcgtgtggc ttctgcttag cacctggtgc
121 acagctcctg ccagggccat ccaggtgacc gtgtccaacc cctaccacgt ggtgatcctc
181 ttccagcctg tgaccctgcc ctgtacctac cagatgacct cgacccccac gcaacccatc
241 gtcatctgga agtacaagtc tttctgccgg gaccgcatcg ccgatgcctt ctccccggcc
301 agcgtcgaca accagctcaa tgcccagctg gcagccggga acccaggcta caacccctac
361 gtcgagtgcc aggacagcgt gcgcaccgtc agggtcgtgg ccaccaagca gggcaacgct
421 gtgaccctgg gagattacta ccagggccgg aggattacca tcaccggaaa tgctgacctg
481 acctttgacc agacggcgtg gggggacagt ggtgtgtatt actgctccgt ggtctcagcc
541 caggacctcc aggggaacaa tgaggcctac gcagagctca tcgtccttga ctggctcttc
601 gtggttgtgg tatgcctggc tgccttcctc atcttcctcc tcctgggcat ctgctggtgc
661 cagtgctgcc cgcacacttg ctgctgctac gtcaggtgcc cctgctgccc agacaagtgc
721 tgctgccccg aggccctgta tgccgccggc aaagcagcca cctcaggtgt tcccagcatt
781 tatgccccca gcacctatgc ccacctgtct cccgccaaga ccccaccccc accagctatg
841 attcccatgg gccctgccta caacgggtac cctggaggat accctggaga cgttgacagg
901 agtagctcag ctggtggcca aggctcctat gtacccctgc ttcgggacac ggacagcagt
961 gtggcctctg aagtccgcag tggctacagg attcaggcca gccagcagga cgactccatg
1021 cgggtcctgt actacatgga gaaggagctg gccaacttcg acccttctcg acctggcccc
1081 cccagtggcc gtgtggagcg ggccatgagt gaagtcacct ccctccacga ggacgactgg
1141 cgatctcggc cttcccgggg ccctgccctc accccgatcc gggatgagga gtggggtggc
1201 cactcccccc ggagtcccag gggatgggac caggagcccg ccagggagca ggcaggcggg
1261 ggctggcggg ccaggcggcc ccgggcccgc tccgtggacg ccctggacga cctcaccccg
1321 ccgagcaccg ccgagtcagg gagcaggtct cccacgagta atggtgggag gagaagccgg
1381 gcctacatgc ccccgcggag ccgcagccgg gacgacctct atgaccaaga cgactcgagg
1441 gacttcccac gctcccggga cccccactac gacgacttca ggtctcggga gcgccctcct
1501 gccgacccca ggtcccacca ccaccgtacc cgggaccctc gggacaacgg ctccaggtcc
1561 ggggacctcc cctatgatgg gcggctactg gaggaggctg tgaggaagaa ggggtcggag
1621 gagaggagga gaccccacaa ggaggaggag gaagaggcct actacccgcc cgcgccgccc
1681 ccgtactcgg agaccgactc gcaggcgtcc cgagagcgca ggctcaagaa gaacttggcc
1741 ctgagtcggg aaagtttagt cgtctgatct gacgttttct acgtagcttt tgtatttttt
1801 tttttaattt gaaggaacac tgatgaagcc ctgccatacc cctcccgagt ctaataaaac
1861 gtataatcac aaaaaaaaaa aaaaaaaa
//