LOCUS BC004371 1862 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens amyloid beta (A4) precursor-like protein 2, mRNA (cDNA clone MGC:10449 IMAGE:3640033), complete cds. ACCESSION BC004371 VERSION BC004371.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1862) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1862) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: f Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4502146. FEATURES Location/Qualifiers source 1..1862 /db_xref="H-InvDB:HIT000031896" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10449 IMAGE:3640033" /tissue_type="Pancreas, adenocarcinoma" /clone_lib="NIH_MGC_39" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1862 /gene="APLP2" /gene_synonym="APPH" /gene_synonym="APPL2" /gene_synonym="CDEBP" /db_xref="GeneID:334" /db_xref="MIM:104776" CDS 63..1631 /gene="APLP2" /gene_synonym="APPH" /gene_synonym="APPL2" /gene_synonym="CDEBP" /codon_start=1 /product="APLP2 protein" /protein_id="AAH04371.1" /db_xref="GeneID:334" /db_xref="MIM:104776" /translation="MAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTG FAVAEPQIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITN VMEANQRVSIDNWCRRDKKQCKSRFVTPFKCLVPPTPLPTNDVDVYFETSADDNEHAR FQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAAS EKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRL HTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQTLSLLYKVPYVAQEIQEEIDE LLQEQRADMDQFTASISETPVDVRVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDG GLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEERESVGPLREDFSLS SSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHG YENPTYKYLEQMQI" misc_feature 186..473 /gene="APLP2" /gene_synonym="APPH" /gene_synonym="APPL2" /gene_synonym="CDEBP" /note="A4_EXTRA; Region: Amyloid A4 extracellular domain" /db_xref="CDD:pfam02177" BASE COUNT 505 a 454 c 529 g 374 t ORIGIN 1 gctaagcgag gagtctgagt gtgtgagctt gagagccgcg cgctagagcg acccggcgag 61 ggatggcggc caccgggacc gcggccgccg cagccacggg caggctcctg cttctgctgc 121 tggtggggct cacggcgcct gccttggcgc tggccggcta catcgaggct cttgcagcca 181 atgccggaac aggatttgct gttgctgagc ctcaaatcgc aatgttttgt gggaagttaa 241 atatgcatgt gaacattcag actgggaaat gggaacctga tccaacaggc accaagagct 301 gctttgaaac aaaagaagaa gttcttcagt actgtcagga gatgtatcca gagctacaga 361 tcacaaatgt gatggaggca aaccagcggg ttagtattga caactggtgc cggagggaca 421 aaaagcaatg caagagtcgc tttgttacac ctttcaagtg tctcgttcct ccaactcctc 481 tgccaaccaa tgatgttgat gtgtatttcg agacctctgc agatgataat gagcatgctc 541 gcttccagaa ggctaaggag cagctggaga ttcggcaccg caaccgaatg gacagggtaa 601 agaaggaatg ggaagaggca gagcttcaag ctaagaacct ccccaaagca gagaggcaga 661 ctctgattca gcacttccaa gccatggtta aagctttaga gaaggaagca gccagtgaga 721 agcagcagct ggtggagacc cacctggccc gagtggaagc tatgctgaat gaccgccgtc 781 ggatggctct ggagaactac ctggctgcct tgcagtctga cccgccacgg cctcatcgca 841 ttctccaggc cttacggcgt tatgtccgtg ctgagaacaa agatcgctta cataccatcc 901 gtcattacca gcacgtgttg gctgttgacc cagaaaaggc ggcccagatg aaatcccagg 961 tgatgacaca tctccacgtg attgaagaaa ggaggaacca aaccctctct ctgctctaca 1021 aagtacctta tgtagcccaa gaaattcaag aggaaattga tgagctcctt caggagcagc 1081 gtgcagatat ggaccagttc actgcctcaa tctcagagac ccctgtggac gtccgggtga 1141 gctctgagga gagtgaggag atcccaccgt tccacccctt ccaccccttc ccagccctac 1201 ctgagaacga aggatctgga gtgggagagc aggatggggg actgatcggt gccgaagaga 1261 aagtgattaa cagtaagaat aaagtggatg aaaacatggt cattgacgag actctggatg 1321 ttaaggaaat gattttcaat gccgagagag ttggaggcct cgaggaagag cgggaatccg 1381 tgggcccact gcgggaggac ttcagtctga gtagcagtgc tctcattggc ctgctggtca 1441 tcgcagtggc cattgccacg gtcatcgtca tcagcctggt gatgctgagg aagaggcagt 1501 atggcaccat cagccacggg atcgtggagg ttgatccaat gctcacccca gaagagcgtc 1561 acctgaacaa gatgcagaac catggctatg agaaccccac ctacaaatac ctggagcaga 1621 tgcagattta ggtggcaggg agcgcggcag ccctggcgga gggatgcagg tgggccggaa 1681 gatcccacga ttccgatcga ctgccaagca gcagccgctg ccaggggctg cgtctgacat 1741 cctgacctcc tggactgtag gactatataa agtactactg tagaactgca atttccattc 1801 ttttaaatgg gtgaaaaatg gtaatataac aatatatgat atataaaaaa aaaaaaaaaa 1861 aa //