LOCUS BC004368 843 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) activator subunit 2
(PA28 beta), mRNA (cDNA clone MGC:10381 IMAGE:3640584), complete
cds.
ACCESSION BC004368
VERSION BC004368.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 843)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 843)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: h Column: 18.
FEATURES Location/Qualifiers
source 1..843
/db_xref="H-InvDB:HIT000031893"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10381 IMAGE:3640584"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..843
/gene="PSME2"
/gene_synonym="PA28B"
/gene_synonym="PA28beta"
/gene_synonym="REGbeta"
/db_xref="GeneID:5721"
/db_xref="HGNC:HGNC:9569"
/db_xref="MIM:602161"
CDS 16..735
/gene="PSME2"
/gene_synonym="PA28B"
/gene_synonym="PA28beta"
/gene_synonym="REGbeta"
/codon_start=1
/product="proteasome (prosome, macropain) activator
subunit 2 (PA28 beta)"
/protein_id="AAH04368.1"
/db_xref="GeneID:5721"
/db_xref="HGNC:HGNC:9569"
/db_xref="MIM:602161"
/translation="MAKPCGVRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLN
QLLQEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVPKCGFLPGNEKVLS
LLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAF
QTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYH
IISSNLEKIVNPKGEEKPSMY"
BASE COUNT 283 a 180 c 214 g 166 t
ORIGIN
1 agcgactgaa gcagcatggc caagccgtgt ggggtgcgcc tgagcgggga agcccgcaaa
61 caggtggagg tcttcagaca gaatcttttc caggaggctg aggaattcct ctacagattc
121 ttgccacaga aaatcatata cctgaatcag ctcttgcaag aggactccct caatgtggct
181 gacttgactt ccctccgggc cccactggac atccccatcc cagaccctcc acccaaggat
241 gatgagatgg aaacagataa gcaggagaag aaagaagtcc ctaagtgtgg atttctccct
301 gggaatgaga aagtcctgtc cctgcttgcc ctggttaagc cagaagtctg gactctcaaa
361 gagaaatgca ttctggtgat tacatggatc caacacctga tccccaagat tgaagatgga
421 aatgattttg gggtagcaat ccaggagaag gtgctggaga gggtgaatgc cgtcaagacc
481 aaagtggaag ctttccagac aaccatttcc aagtacttct cagaacgtgg ggatgctgtg
541 gccaaggcct ccaaggagac tcatgtaatg gattaccggg ccttggtgca tgagcgagat
601 gaggcagcct atggggagct cagggccatg gtgctggacc tgagggcctt ctatgctgag
661 ctttatcata tcatcagcag caacctggag aaaattgtca acccaaaggg tgaagaaaag
721 ccatctatgt actgaacccg ggactagaag gaaaataaat gatctatatg ttgtgtggaa
781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
841 aaa
//