LOCUS BC004335 1142 bp mRNA linear HUM 27-APR-2005
DEFINITION Homo sapiens single stranded DNA binding protein 3, mRNA (cDNA
clone IMAGE:3631555), partial cds.
ACCESSION BC004335
VERSION BC004335.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1142)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1142)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1142
/db_xref="H-InvDB:HIT000031870"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3631555"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1142
/gene="SSBP3"
/gene_synonym="CSDP"
/gene_synonym="FLJ10355"
/gene_synonym="SSDP"
/gene_synonym="SSDP1"
/db_xref="GeneID:23648"
/db_xref="MIM:607390"
CDS <1..651
/gene="SSBP3"
/gene_synonym="CSDP"
/gene_synonym="FLJ10355"
/gene_synonym="SSDP"
/gene_synonym="SSDP1"
/codon_start=1
/product="SSBP3 protein"
/protein_id="AAH04335.2"
/db_xref="GeneID:23648"
/db_xref="MIM:607390"
/translation="GVPGTQPLLPNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGP
QNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSIPYSSSSPGTYVGPPGGGG
PPGTPIMPSPADSTNSSDNIYTMINPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMN
GSLGSGDIDGLPKNSPNNISGISNPPGTPRDDGELGGNFLHSFQNDNYSPSMTMSV"
BASE COUNT 313 a 324 c 250 g 255 t
ORIGIN
1 ggagttcctg ggacacagcc attgctgccc aattctatgg atcccacacg acaacaaggc
61 caccccaaca tgggaggatc aatgcagaga atgaaccctc cccgaggcat ggggcccatg
121 ggtcccggcc cacagaatta cggcagcggc atgagaccac cacccaactc cctcggcccc
181 gccatgcccg ggattaacat gggcccggga gctggcagac cctggcccaa tcctaacagt
241 gctaactcaa ttccatactc ctcctcatca cctggtacct atgtgggacc ccctggtggt
301 ggcggtcctc caggaacacc cattatgccc agtcccgcag attcaacaaa ttccagtgac
361 aacatctaca caatgattaa tccagtgccg cctggaggca gccggtccaa cttcccgatg
421 ggtcccggct cggacggtcc gatgggcggc atgggtggca tggagccaca ccacatgaat
481 ggatcattag ggtcaggcga catagacgga cttccaaaaa attctcctaa caacataagt
541 ggcattagca atcctccagg cacccctcga gatgacggcg agctaggagg gaacttcctc
601 cactcctttc agaacgacaa ttattctcca agcatgacga tgagtgtgtg atcccccctt
661 ctccgagacg ctgagagagc aggcattgca ggcgggaaga tgccagaaat tatgcaagaa
721 gtgaggtgtc attatccagg agctggtggg gagggcatct ccctgctccc ctcaaccccc
781 tcccacccca tccacgcccc ctacctttcc caattttagt ttcatgcaat aaaaaggcca
841 aactttttat tccataaaac aagaaggaca aaactctcaa aaatgtattt caagtcagtg
901 accagaaaaa tcccacccct tgccctttcc ccaaaggacc ttttctgtac atgacacttt
961 tttgttgttt tttgtttggg gttttaccat tgttgggatt tttttatttg ttttcagggg
1021 ggttttttgg gggaaaattt ttttaaatgg aagcttctag caagcccccc accccaatca
1081 acctctatgc tttcttctta aaaaaaaaaa aaaaaggaaa aaggaaaaaa aaaaaaaaaa
1141 aa
//