LOCUS BC004323 952 bp mRNA linear HUM 04-JUN-2004
DEFINITION Homo sapiens ribosomal protein L3, mRNA (cDNA clone IMAGE:3628762),
partial cds.
ACCESSION BC004323
VERSION BC004323.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 952)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 952)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: a Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..952
/db_xref="H-InvDB:HIT000031864"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3628762"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..952
/gene="RPL3"
/gene_synonym="TARBP-B"
/db_xref="GeneID:6122"
/db_xref="MIM:604163"
CDS <1..879
/gene="RPL3"
/gene_synonym="TARBP-B"
/codon_start=1
/product="RPL3 protein"
/protein_id="AAH04323.2"
/db_xref="GeneID:6122"
/db_xref="MIM:604163"
/translation="DECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKK
YCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQ
DEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQ
KGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTND
FVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKA
FMGPLKKDRIAKEEGA"
BASE COUNT 275 a 222 c 271 g 184 t
ORIGIN
1 gatgaatgca agaggcgttt ctataagaat tggcataaat ctaagaagaa ggcctttacc
61 aagtactgca agaaatggca ggatgaggat ggcaagaagc agctggagaa ggacttcagc
121 agcatgaaga agtactgcca agtcatccgt gtcattgccc acacccagat gcgcctgctt
181 cctctgcgcc agaagaaggc ccacctgatg gagatccagg tgaacggagg cactgtggcc
241 gagaagctgg actgggcccg cgagaggctt gagcagcagg tacctgtgaa ccaagtgttt
301 gggcaggatg agatgatcga cgtcatcggg gtgaccaagg gcaaaggcta caaaggggtc
361 accagtcgtt ggcacaccaa gaagctgccc cgcaagaccc accgaggcct gcgcaaggtg
421 gcctgtattg gggcatggca tcctgctcgt gtagccttct ctgtggcacg cgctgggcag
481 aaaggctacc atcaccgcac tgagatcaac aagaagattt ataagattgg ccagggctac
541 cttatcaagg acggcaagct gatcaagaac aatgcctcca ctgactatga cctatctgac
601 aagagcatca accctctggg tggctttgtc cactatggtg aagtgaccaa tgactttgtc
661 atgctgaaag gctgtgtggt gggaaccaag aagcgggtgc tcaccctccg caagtccttg
721 ctggtgcaga cgaagcggcg ggctctggag aagattgacc ttaagttcat tgacaccacc
781 tccaagtttg gccatggccg cttccagacc atggaggaga agaaagcatt catgggacca
841 ctgaagaaag accgaattgc aaaggaagaa ggagcttaat gccaggaaca gattttgcag
901 ttggtggggt ctcaataaaa gttattttcc actgaaaaaa aaaaaaaaaa aa
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