LOCUS BC004296 3873 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens bicaudal D homolog 2 (Drosophila), mRNA (cDNA clone
IMAGE:3622452), partial cds.
ACCESSION BC004296
VERSION BC004296.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3873)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3873)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: h Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3873
/db_xref="H-InvDB:HIT000086326"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3622452"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3873
/gene="BICD2"
/gene_synonym="KIAA0699"
/db_xref="GeneID:23299"
CDS <1..1763
/gene="BICD2"
/gene_synonym="KIAA0699"
/codon_start=3
/product="BICD2 protein"
/protein_id="AAH04296.1"
/db_xref="GeneID:23299"
/translation="QLEEALETLKTEREQKNSLRKELSHYMSINDSFYTSHLHVSLDG
LKFSDDAAEPNNDAEALVNGFEHGGLAKLPLDNKTSTPKKEGLAPPSPSLVSDLLSEL
NISEIQKLKQQLMQMEREKAGLLATLQDTQKQLEHTRGSLSEQQEKVTRLTENLSALR
RLQASKERQTALDNEKDRDSHEDGDYYEVDINGPEILACKYHVAVAEAGELREQLKAL
RSTHEAREAQHAEEKGRYEAEGQALTEKVSLLEKASRQDRELLARLEKELKKVSDVAG
ETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYREGQGGAGRTSPGGR
TSPEARGRRSPILLPKGLLAPEAGRADGGTGDSSPSPGSSLPSPLSDPRREPMNIYNL
IAIIRDQIKHLQAAVDRTTELSRQRIASQELGPAVDKDKEALMEEILKLKSLLSTKRE
QITTLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSL
RAMFATRCDEYITQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLELLELDHE
QTRRGRAKAAPKTKPATPSL"
BASE COUNT 1023 a 957 c 1041 g 852 t
ORIGIN
1 ggcagctgga ggaggcgctg gagaccctga agacggagcg cgaacagaag aacagcctgc
61 gcaaggagct gtcacactac atgagcatca atgactcctt ctacaccagc cacctgcatg
121 tctcgctgga tggcctcaag ttcagtgacg atgctgccga gcccaacaac gatgccgagg
181 ccctggtcaa tggctttgag cacggcggcc tggccaagct gccactggac aacaagacct
241 ccacgcccaa gaaggagggc ctcgcaccgc cctcccccag cctcgtctcc gacctactca
301 gtgagctcaa catctctgag atccagaagc tgaagcagca gctgatgcag atggagcggg
361 aaaaggcggg cctgctggca acgctgcagg acacacagaa gcagctggag cacacgcggg
421 gctccctgtc agaacagcag gagaaggtga cccgcctcac agagaatctg agtgccctgc
481 ggcgcctgca ggccagcaag gagcggcaga cagccctgga caacgagaag gaccgtgaca
541 gccatgagga tggggactac tacgaggtgg acatcaacgg gcctgagatc ttggcctgca
601 agtaccatgt ggctgtggct gaggctggcg agctccgcga gcagctcaag gcactgcgca
661 gcacgcacga ggctcgtgag gcccagcacg ccgaggagaa gggccgctat gaggctgagg
721 gccaggcact cacggagaag gtctccctgc tagagaaggc cagccgccag gaccgcgagc
781 tgctggcccg gctggagaag gagctaaaga aggtgagcga cgtcgccggc gagacacagg
841 gcagcctgag tgtggcccag gatgagctgg tgaccttcag tgaggagctg gccaatctct
901 accaccacgt gtgcatgtgc aacaatgaga cacccaaccg tgtcatgctg gactactacc
961 gcgagggcca gggcggggcc ggccgcacca gtcccggggg ccgcaccagc cccgaggcgc
1021 gtggccggcg ctcacccatc ctcctaccca aggggctgct ggctcctgag gcgggccgag
1081 cagatggtgg gacgggggac agcagcccct cgcctggctc ctcactgcca tcacccctga
1141 gtgacccacg ccgggagccc atgaacatct acaacctgat cgctatcatc cgtgaccaga
1201 tcaagcacct gcaggcagcc gtggaccgca ccacggagct gtcacgccag cgcattgcct
1261 ctcaggagct gggccccgcc gtggacaagg acaaggaagc gcttatggag gagatcctca
1321 agctgaagtc gctgctcagc accaagcggg agcagatcac cacgctgcgc actgtgctca
1381 aggccaacaa gcagacggcc gaggtggccc ttgccaacct gaagagcaag tatgagaatg
1441 agaaggccat ggttaccgag accatgatga agctgcgcaa tgagctcaag gccctcaagg
1501 aggacgcagc caccttctcc tcgctgcgtg ctatgtttgc caccaggtgt gacgagtaca
1561 ttacacagct ggatgagatg cagcggcagc tggcggctgc tgaggacgag aagaagacgc
1621 tgaactcgct gctgcgcatg gccatccagc agaagctggc gctgacccag cggctggagc
1681 tgctcgagct ggaccatgag cagacccggc gtggccgtgc caaagccgcc ccgaagacca
1741 agccagccac accgagcctg tagagtagct gccaggagga cttggccacc cggccctgtc
1801 acactgcagc cccttcccct tccctctcgt ggcccacaag gaggaaggaa gggcaaccta
1861 aaagcccact tagaaacttt ttggatatgc cactgcaatt cttttcaaaa tagcattccc
1921 caggttttta atgggaggaa aaaaagcttt aatgttgagc atgctgcgag ctgctgcgtg
1981 gaaaggcctc tgtatgggcc gaagaccctt cttccctggc tgccaggctc gccaggagcc
2041 cactggaaac gcccaccacg ggggctcctt gttacacatg ttcttttttt atccgatcaa
2101 cctgtgcact tttgatattt tgatattata tttgcttcct taattcctcg cgtagagacg
2161 gtctcaggtg ccgtggtcta tgctcgtggt cctgtagctg tccgcctcag ctcccaccgt
2221 gtttgtctgg tgtcagcacg aggcagagct gtgtgctcca tagcgtgtag ctttagactc
2281 ggagatgagt gctttgaccc agcgaggagc tcagctaagt gtatccacgc tgtggttcag
2341 cagcctttag atcatacggc attgtggttc atgtttgaaa ttacagattt taaatgccat
2401 gttcattaag aaatccaggg tattcagatt ctggggtttt tcatattgta ttattattat
2461 tcttaggaat agttcaatgt aacaagaaga aaacttgacc tttgctctgg ttaaaacagt
2521 aataggcact tgaaaaaaaa agataaatta ttgaatgagt agtattacct acaaattcca
2581 gaattttctg ggttttagga cgttgtgaag catgactgat taacagaatt ttatacaact
2641 gtaccaataa aattccaaat tggaattgtt ttgttactct ggttgttgtg ccaaattgtg
2701 gtacacttag aaaattctac agtcgtcgat ttttagggtg ttctctttca acaccttttt
2761 gttagtaatc attgccagta gtgccttcat cagttaaggg aggtgtccca gcacagatca
2821 ttctcaaaag cgagcaggga agagctagtg ggcatgctga aggccagcgt ggacagcagg
2881 tgaggcaggt gctcctcaca cccagacctg ggcatcttca ttgagggaaa gaaaacagtc
2941 attgtgcaaa attctgttag tcagtgattc tttacttgca aattcagggg cttagaaaat
3001 gaaagcaaac acaaaacctt gagtgtgctt tgggaaccaa atggaccttc tgggacaagc
3061 tgagcaagct gtatgaacgc cacgtttgtg aagagctgag ggtatcagga gggccgacgc
3121 tgtgttggca tgcgcagtag gggatgaggg ttagccatag tattctttgc aaatgtgaaa
3181 gcgagacatt atatcttctc ttgcttggtg taactaatca ctgttaattt caggaaacag
3241 aactcattaa aactccttag caaaccaggt ctacatcctg ttttgtttgc tgagtgaggt
3301 tagtgggagt ggtcaaattg gtactcttgg aggaagaaaa actgtccttc cttctccaaa
3361 aaaggaaaaa ttataataat ataaatgaca aaaataaaag aattctgttt cctggaataa
3421 gcatttctta ttcctagttg tagggactcc tatttttacc ttccgttaca gtgttgattc
3481 ataagaaata ttgttacatt tgagataact tcatctgtat ggggtattta tttgcaatga
3541 tgtctgagta ctgtattttt tctgtgcatt accttagtgt cagaatgttg gtctttattt
3601 taaagtcata tgcatgttct cctgccaagg aacctttaca cagacccaaa caaaaaaata
3661 ataatcaaat gccttcaatt tctgagaaaa tgaggcagag catggaaaag gaataggaag
3721 gagaaattaa ttgagatttt caggacacag acatatgatg tgaatgccta caaagccagt
3781 gcgcatagga acagtgggcc tgggtaaaga gtcacattgg taggaccaat aaagaataat
3841 aaaaagacaa agcacaaaaa aaaaaaaaaa aaa
//