LOCUS BC004286 4179 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens integrator complex subunit 1, mRNA (cDNA clone
IMAGE:3618123), partial cds.
ACCESSION BC004286
VERSION BC004286.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4179)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4179)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: j Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..4179
/db_xref="H-InvDB:HIT000086322"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3618123"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..4179
/gene="INT1"
/gene_synonym="DKFZp586J0619"
/gene_synonym="KIAA1440"
/db_xref="GeneID:26173"
CDS <1..2024
/gene="INT1"
/gene_synonym="DKFZp586J0619"
/gene_synonym="KIAA1440"
/codon_start=3
/product="INT1 protein"
/protein_id="AAH04286.1"
/db_xref="GeneID:26173"
/translation="SLRLGHLLCRSRNPDFLLHIIQRQASSQSMPWLADLVQSSEGSL
DVLPVQCLCEFLLHDAVDDAASGEEDDEGESKEQKAKKRQRQQKQRQLLGRLQDLLLG
PKADEQTTCEVLDYFLRRLGSSQVASRVLAMKGLSLVLSEGSLRDGEEKEPPMEEDVG
DTDVLQGYQWLLRDLPRLPLFDSVRSTTALALQQAIHMETDPQTISAYLIYLSQHTPV
EEQAQHSDLALDVARLVVERSTIMSHLFSKLSPSAASDAVLSALLSIFSRYVRRMRQS
KEGEEVYSWSESQDQVFLRWSSGETATMHILVVHAMVILLTLGPPRADDSEFQALLDI
WFPEEKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVLRLVDAALQDLEPQQLLLFVQS
FGIPVSSMSKLLQFLDQAVAHDPQTLEQNIMDKNYMAHLVEVQHERGASGGQTFHSLL
TASLPPRRDSTEAPKPKSSPEQPIGQGRIRVGTQLRVLGPEDDLAGMFLQIFPLSLDP
RWQSSSPRPVALALQQALGQELARVVQGSPEVPGITVRVLQALATLLSSPHGGALVMS
MHRSHFLACPLLRQLCQYQRCVPQDTGFSSLFLKVLLQMLQWLDSPGVEGGPLRAQLR
MLASQASAGRRLSDVRGGLLRLAEALAFRQDLEVVSSTVRFQPVSPLWW"
BASE COUNT 712 a 1412 c 1337 g 718 t
ORIGIN
1 agtccctccg cctcgggcac ctcttgtgcc gcagccgaaa ccctgacttt ctcctccaca
61 tcatccagcg gcaggcctcc tcgcagtcca tgccctggct ggcggacctg gtacagtcca
121 gcgagggctc cctggacgtg ctgcccgtgc agtgtctgtg cgagttcctg ctgcacgatg
181 ctgtggacga tgctgcttcc ggggaggagg acgacgaggg cgagagcaag gagcagaagg
241 ccaagaagcg gcagaggcaa cagaagcagc ggcagctgct gggccgcctg caggacctgc
301 tactgggccc gaaggctgat gagcagacca cgtgtgaggt gctggactac ttcttgcggc
361 gcctcggctc ctcccaggtg gcctcccgcg tgctggccat gaagggtttg tcgctggtgc
421 tttcggaggg cagcctgcgg gacggggagg agaaggagcc ccccatggag gaggatgtgg
481 gggacacaga tgtgctgcag ggctatcagt ggctgctgcg ggacctgcct cgcctgcctc
541 tgttcgacag cgtcaggagc accacagccc tggccctgca gcaggcaatc cacatggaga
601 ctgatcccca gaccatcagc gcctacctga tctacttgtc ccagcacacg cctgtggagg
661 agcaggccca gcacagcgac ctggccctgg acgtggcccg gctggtcgtg gagcgctcca
721 ccatcatgtc ccacctcttc tcgaagctct ccccgagtgc cgcgtcggac gccgtgctga
781 gcgctctgtt gtccatcttc tcacgctacg tgaggcgcat gcggcagagc aaggagggcg
841 aggaggtcta cagctggtcg gagtctcagg accaggtctt cctacgctgg agcagcgggg
901 agacagccac catgcacatc ctcgtggtcc atgccatggt gatcctgctg acgctgggcc
961 cgcctcgagc cgacgacagc gagttccagg cgctgctgga catctggttt ccggaggaga
1021 agccactgcc caccgccttc ctggtggaca catcggagga ggcgctgctg cttcctgact
1081 ggctgaagct gcgcatgatc cgttctgagg tgctccgcct ggtggacgcc gccctgcagg
1141 acctggagcc gcagcagctg ctgctgttcg tgcagtcgtt tggcatcccc gtgtccagca
1201 tgagcaaact cctccagttc ctggaccagg cagtggccca cgacccccag actctggagc
1261 agaacatcat ggacaagaat tacatggccc acctggtgga ggtccagcat gagcgcggcg
1321 cctccggagg ccagactttc cactccttgc tcacagcctc cctgccgccc cgccgagaca
1381 gcacagaggc acccaaacca aagagcagcc cagagcagcc cataggccag ggccggattc
1441 gggtggggac ccagctccgg gtgctgggcc ctgaggacga cctggctggc atgttcctcc
1501 agattttccc gctcagcctg gaccctcggt ggcagagctc cagtccccgc cccgtggccc
1561 tcgccctgca gcaggccctg ggccaggagc tggcccgcgt cgtccagggc agccccgagg
1621 tgccgggcat cacggtgcgt gtcctgcagg ccctcgccac cctgctcagc tccccacacg
1681 gcggtgccct ggtgatgtcc atgcaccgta gccacttcct ggcctgcccg ctgctgcgcc
1741 agctctgcca gtaccagcgc tgtgtgccac aggacaccgg cttctcctcg ctcttcctga
1801 aggtgctcct gcagatgctg cagtggctgg acagccctgg cgtggagggc gggcccctgc
1861 gggcacagct caggatgctt gccagccagg cctcagccgg gcgcaggctc agtgatgtgc
1921 gaggggggct cctgcgcctg gccgaggccc tggccttccg tcaggacctg gaggtggtca
1981 gctccaccgt ccgtttccag cctgtaagcc cgttgtggtg gtgagctccc tgctgctgca
2041 ggaggaggag cccctggctg gggggaagcc gggtgcggac ggtggcagcc tggaggccgt
2101 gcggctgggg ccctcgtcag gcctcctagt ggactggctg gaaatgctgg accccgaggt
2161 ggtcagcagc tgccccgacc tgcagctcag gctgctcttc tcccggagga agggcaaagg
2221 tcaggcccag gtgccctcgt tccgtcccta cctcctgacc ctcttcacgc atcagtccag
2281 ctggcccaca ctgcaccagt gcatccgagt cctgctgggc aagagccggg aacagaggtt
2341 cgacccctct gcctctctgg acttcctctg ggcctgcatc catgttcctc gcatctggca
2401 ggggcgggac cagcgcaccc cgcagaagcg gcgggaggag ctggtgctgc gggtccaggg
2461 cccggagctc atcagcctgg tggagctgat cctggccgag gcggagacgc ggagccagga
2521 cggggacaca gccgcctgca gcctcatcca ggcccggctg cccctgctgc tcagctgctg
2581 ctgtggggac gatgagagtg tcaggaaggt gacggagcac ctgtcaggct gcatccagca
2641 gtggggagac agcgtgctgg gcaggcgctg ccgagacctt ctcctgcagc tctacctaca
2701 gcggccggag ctgcgggtgc ccgtgcctga ggtcctactg cacagcgaag gggctgccag
2761 cagcagcgtc tgcaagctgg acggactcat ccaccgcttc atcacgctcc ttgcggacac
2821 cagcgactcc cgggcgttgg agaaccgagg ggcggatgcc agcatggcct gccggaagct
2881 ggcggtggcg cacccgctgc tgctgctcag gcacctgccc atgatcgcgg cgctcctgca
2941 cggccgcacc cacctcaact tccaggagtt ccggcagcag aaccacctga gctgcttcct
3001 gcacgtgctg ggcctgctgg agctgctgca gccgcacgtg ttccgcagcg agcaccaggg
3061 ggcgctgtgg gactgccttc tgtccttcat ccgcctgctg ctgaattaca ggaagtcctc
3121 ccgccatctg gctgccttca tcaacaagtt tgtgcagttc atccataagt acattaccta
3181 caatgcccca gcagccatct ccttcctgca gaagcacgcc gacccgctcc acgacctgtc
3241 cttcgacaac agtgacctgg tgatgctgaa atccctcctt gcagggctca gcctgcccag
3301 cagggacgac aggaccgacc gaggcctgga cgaagagggc gaggaggaga gctcagccgg
3361 ctccttgccc ctggtcagcg tctccctgtt cacccctctg accgcggccg agatggcccc
3421 ctacatgaaa cggctttccc ggggccaaac ggtggaggat ctgctggagg ttctgagtga
3481 catagacgag atgtcccggc ggagacccga gatcctgagc ttcttctcga ccaacctgca
3541 gcggctgatg agctcggccg aggagtgttg ccgcaacctc gccttcagcc tggccctgcg
3601 ctccatgcag aacagcccca gcattgcagc cgctttcctg cccacgttca tgtactgcct
3661 gggcagccag gactttgagg tggtgcagac ggccctccgg aacctgcctg agtacgctct
3721 cctgtgccaa gagcacgcgg ctgtgctgct ccaccgggcc ttcctggtgg gcatgtacgg
3781 ccagatggac cccagcgcgc agatctccga ggccctgagg atcctgcata tggaggccgt
3841 gatgtgagcc tgtggcagcc gacccccctc caagccccgg cccgtcccgt ccccggggat
3901 cctcgaggca aagcccagga agcgtgggcg ttgctggtct gtccgaggag gtgagggcgc
3961 cgagccctga ggccaggcag gcccaggagc aatactccga gccctggggt ggctccgggc
4021 cggccgctgg catcaggggc cgtccagcaa gccctcattc accttctggg ccacagccct
4081 gccacggagc ggcggatccc cccgggcatg gcctgggctg gttttgaatg aaacgacctg
4141 aactgtcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//