LOCUS BC004254 2206 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein F, mRNA (cDNA clone MGC:10565 IMAGE:3633625), complete cds. ACCESSION BC004254 VERSION BC004254.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2206) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2206) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: k Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14141150. FEATURES Location/Qualifiers source 1..2206 /db_xref="H-InvDB:HIT000031821" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10565 IMAGE:3633625" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_9" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2206 /gene="HNRPF" /gene_synonym="HNRNPF" /gene_synonym="mcs94-1" /db_xref="GeneID:3185" /db_xref="HGNC:HGNC:5039" /db_xref="MIM:601037" CDS 324..1571 /gene="HNRPF" /gene_synonym="HNRNPF" /gene_synonym="mcs94-1" /codon_start=1 /product="heterogeneous nuclear ribonucleoprotein F" /protein_id="AAH04254.1" /db_xref="GeneID:3185" /db_xref="HGNC:HGNC:5039" /db_xref="MIM:601037" /translation="MMLGPEGGEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVH FIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTEMDWVLKHSGP NSADSANDGFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFA SQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARR YIGIVKQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRY GDSEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVRVHIEIGPDGRVTGEADVE FATHEEAVAAMSKDRANMQHRYIELFLNSTTGASNGAYSSQVMQGMGVSAAQATYSGL ESQSVSGCYGAGYSGQNSMGGYD" BASE COUNT 586 a 475 c 582 g 563 t ORIGIN 1 gtcgtggaag caggactgcg ccgcgtcttc ctcaaggtgg ggttcggggg gccaccgaat 61 cgctgtcacg ccggcaggtt gagaacaaaa acatgcacct ggagtttccc cggagccctc 121 tgcgtggttg agcttcggtg gaatttcggg gctcttggct gccagccgcg cttgcctggt 181 agcaacagaa accagtcctg ctctcctccg tggacatttc attaccatcc agaagtgtct 241 cccactgaag gcatccgtgg ttgtttttaa gccacaaaaa agccacaccc aagatcacct 301 gacacccacc ctgacaagtg tccatgatgc tgggccctga gggaggtgaa ggctttgtgg 361 tcaagctccg tggcctgccc tggtcctgct ctgttgagga cgtgcagaac ttcctctctg 421 actgcacgat tcatgatggg gccgcaggtg tccatttcat ctacactaga gagggcaggc 481 agagtggtga ggcttttgtt gaacttggat cagaagatga tgtaaaaatg gccctgaaaa 541 aagacaggga aagcatggga caccggtaca ttgaggtgtt caagtcccac agaaccgaga 601 tggattgggt gttgaagcac agtggtccca acagtgccga cagcgccaac gatggcttcg 661 tgcggcttcg aggactccca tttggatgca caaaggaaga aattgttcag ttcttctcag 721 ggttggaaat tgtgccaaac gggatcacat tgcctgtgga ccccgaaggc aagattacag 781 gggaagcgtt cgtgcagttt gcctcgcagg agttagctga gaaggctcta gggaaacaca 841 aggagaggat agggcacagg tacattgagg tgtttaagag cagccaggag gaagttaggt 901 catactcaga tccccctctg aagttcatgt ccgtgcagcg gccagggccc tatgaccggc 961 ccgggactgc caggaggtac attggcatcg tgaagcaggc aggcctggaa aggatgaggc 1021 ctggtgccta cagcacaggc tacgggggct acgaggagta cagtggcctc agtgatggct 1081 acggcttcac caccgacctg ttcgggagag acctcagcta ctgtctctcc gggatgtatg 1141 accacagata cggcgacagt gagttcacag tgcagagcac cacaggccac tgtgtccaca 1201 tgaggggcct gccgtacaaa gcgaccgaga acgacattta caacttcttc tctcctctca 1261 accctgtgag agtccatatt gagattggcc cagatggaag agtgacgggt gaagcagatg 1321 ttgagtttgc tactcatgaa gaagctgtgg cagctatgtc caaagacagg gccaatatgc 1381 agcacagata tatagaactc ttcttgaatt caacaacagg ggccagcaat ggggcgtata 1441 gcagccaggt gatgcaaggc atgggggtgt ctgctgccca ggccacttac agtggcctgg 1501 agagccagtc agtgagtggc tgttacgggg ccggctacag tgggcagaac agcatgggtg 1561 gctatgacta gttttgttag gaacatttga gttacttcaa tcattttcac aggcagccaa 1621 caagcaatta agagcagtta taatagagga agctggggga cccattttgc accatgagtt 1681 tgtgaaaaat ctggattaaa aaattacctc ttcagtgttt tctcatgcaa aattttcttc 1741 tagcatgtga taatgagtaa actaaaacta ttttcagctt ttctcaatta acattttggt 1801 agtatacttc agagtgatgt tatctaagtt taagtagttt aagtatgtta aatgtggatc 1861 ttttacacca catcacagtg aacacactgg ggagacgtgc ttttttggaa aactcaaagg 1921 tgctagctcc ctgattcaaa gaaatatttc tcatgtttgt tcattctagt ttatattttc 1981 atttaaaatc ctttaggtta agtttaagct ttttaaaagt tagttttgag aattgagaca 2041 caatactaat actgtaggaa ttggtgaggc cttgacttaa aactttcttt gtactgtgat 2101 ttccttttgg gtgtattttg ctaagtgaaa cttgttaaat tttttgttaa ctaaattttt 2161 ttcttaaaat aaagactttt tcacaaaaaa aaaaaaaaaa aaaaaa //