LOCUS BC004253 1393 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens keratin 18, mRNA (cDNA clone MGC:10564 IMAGE:3631540), complete cds. ACCESSION BC004253 VERSION BC004253.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1393) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1393) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: e Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40354194. FEATURES Location/Qualifiers source 1..1393 /db_xref="H-InvDB:HIT000031820" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10564 IMAGE:3631540" /tissue_type="Uterus, endometrium adenocarcinoma" /clone_lib="NIH_MGC_44" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1393 /gene="KRT18" /gene_synonym="CYK18" /gene_synonym="K18" /db_xref="GeneID:3875" /db_xref="HGNC:HGNC:6430" /db_xref="MIM:148070" CDS 27..1319 /gene="KRT18" /gene_synonym="CYK18" /gene_synonym="K18" /codon_start=1 /product="keratin 18" /protein_id="AAH04253.1" /db_xref="GeneID:3875" /db_xref="HGNC:HGNC:6430" /db_xref="MIM:148070" /translation="MSFTTRSTFSTNYRSLGSVQAPSYGARPVSSAASVYAGAGGSGS RISVSRSTSFRGGMGSGGLATGIAGGLAGMGGIQNEKETMQSLNDRLASYLDRVRSLE TENRRLESKIREHLEKKGPQVRDWSHYFKIIEDLRAQIFANTVDNARIVLQIDNARLA ADDFRVKYETELAMRQSVENDIHGLRKVIDDTNITRLQLETEIEALKEELLFMKKNHE EEVKGLQAQIASSGLTVEVDAPKSQDLAKIMADIRAQYDELARKNREELDKYWSQQIE ESTTVVTTQSAEVGAAETTLTELRRTVQSLEIDLDSMRNLKASLENSLREVEARYALQ MEQLNGILLHLESELAQTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFNL GDALDSSNSMQTIQKTTTRRIVDGKVVSETNDTKVLRH" BASE COUNT 361 a 382 c 417 g 233 t ORIGIN 1 ctgtcctttc tctctccccg gacagcatga gcttcaccac tcgctccacc ttctccacca 61 actaccggtc cctgggctct gtccaggcgc ccagctacgg cgcccggccg gtcagcagcg 121 cggccagcgt ctatgcaggc gctgggggct ctggttcccg gatctccgtg tcccgctcca 181 ccagcttcag gggcggcatg gggtccgggg gcctggccac cgggatagcc gggggtctgg 241 caggaatggg aggcatccag aacgagaagg agaccatgca aagcctgaac gaccgcctgg 301 cctcttacct ggacagagtg aggagcctgg agaccgagaa ccggaggctg gagagcaaaa 361 tccgggagca cttggagaag aagggacccc aggtcagaga ctggagccat tacttcaaga 421 tcatcgagga cctgagggct cagatcttcg caaatactgt ggacaatgcc cgcatcgttc 481 tgcagattga caatgcccgt cttgctgctg atgactttag agtcaagtat gagacagagc 541 tggccatgcg ccagtctgtg gagaacgaca tccatgggct ccgcaaggtc attgatgaca 601 ccaatatcac acgactgcag ctggagacag agatcgaggc tctcaaggag gagctgctct 661 tcatgaagaa gaaccacgaa gaggaagtaa aaggcctaca agcccagatt gccagctctg 721 ggttgaccgt ggaggtagat gcccccaaat ctcaggacct cgccaagatc atggcagaca 781 tccgggccca atatgacgag ctggctcgga agaaccgaga ggagctagac aagtactggt 841 ctcagcagat tgaggagagc accacagtgg tcaccacaca gtctgctgag gttggagctg 901 ctgagacgac gctcacagag ctgagacgta cagtccagtc cttggagatc gacctggact 961 ccatgagaaa tctgaaggcc agcttggaga acagcctgag ggaggtggag gcccgctacg 1021 ccctacagat ggagcagctc aacgggatcc tgctgcacct tgagtcagag ctggcacaga 1081 cccgggcaga gggacagcgc caggcccagg agtatgaggc cctgctgaac atcaaggtca 1141 agctggaggc tgagatcgcc acctaccgcc gcctgctgga agatggcgag gactttaatc 1201 ttggtgatgc cttggacagc agcaactcca tgcaaaccat ccaaaagacc accacccgcc 1261 ggatagtgga tggcaaagtg gtgtctgaga ccaatgacac caaagttctg aggcattaag 1321 ccagcagaag cagggtaccc tttggggagc aggaggccaa taaaaagttc agagttaaaa 1381 aaaaaaaaaa aaa //