LOCUS BC004243 1523 bp mRNA linear HUM 04-JUN-2004
DEFINITION Homo sapiens branched chain aminotransferase 2, mitochondrial, mRNA
(cDNA clone IMAGE:3615774), partial cds.
ACCESSION BC004243
VERSION BC004243.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1523)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1523)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: b Column: 7.
FEATURES Location/Qualifiers
source 1..1523
/db_xref="H-InvDB:HIT000031810"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3615774"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1523
/gene="BCAT2"
/gene_synonym="BCAM"
/gene_synonym="BCT2"
/db_xref="GeneID:587"
/db_xref="MIM:113530"
CDS <1..1141
/gene="BCAT2"
/gene_synonym="BCAM"
/gene_synonym="BCT2"
/codon_start=2
/product="BCAT2 protein"
/protein_id="AAH04243.2"
/db_xref="GeneID:587"
/db_xref="MIM:113530"
/translation="LLSVPWLLCGPRRYASSSFKAADLQLEMTQKPHKKPGPGEPLVF
GKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQV
RLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVL
IGNEPSLGVSQPTRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLG
GNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLN
GVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPV
HRILYKDRNLHIPTMENGPELILRFQKELKEIQYGIRAHEWMFPV"
BASE COUNT 309 a 470 c 434 g 310 t
ORIGIN
1 gcttctctct gtcccttggc ttctgtgtgg tcccagaaga tatgcctcct ccagtttcaa
61 ggctgcagac ctgcagctgg aaatgacaca gaagcctcat aagaagcctg gccccggcga
121 gcccctggtg tttgggaaga catttaccga ccacatgctg atggtggaat ggaatgacaa
181 gggctggggc cagccccgaa tccagccctt ccagaacctc acgctgcacc cagcctcctc
241 cagcctccac tactccctgc agctgtttga gggcatgaag gcgttcaaag gcaaagacca
301 gcaggtgcgc ctcttccgcc cctggctcaa catggaccgg atgctgcgct cagccatgcg
361 cctgtgcctg ccgagtttcg acaagctgga gttgctggag tgcatccgcc ggctcatcga
421 agtggacaag gactgggtcc ccgatgccgc cggcaccagc ctctatgtgc ggcctgtgct
481 cattgggaac gagccctcgc tgggtgtcag ccagcccacg cgcgcgctcc tgttcgtcat
541 tctctgccca gtgggtgcct acttccctgg aggctccgtg accccggtct ccctcctggc
601 cgacccagcc ttcatccggg cctgggtggg cggggtcggc aactacaagt taggtgggaa
661 ttatgggccc accgtgttag tgcaacagga ggcactcaag cggggctgtg aacaggtcct
721 ctggctgtat gggcccgacc accagctcac cgaggtggga accatgaaca tctttgtcta
781 ctggacccac gaagatgggg tgctggagct ggtgacgccc ccgctgaatg gtgttatcct
841 gcctggagtg gtcagacaga gtctactgga catggctcag acctggggtg agttccgggt
901 ggtggagcgc acgatcacca tgaagcagtt gctgcgggcc ctggaggagg gccgcgtgcg
961 ggaagtcttt ggctcgggca ccgcttgcca ggtctgccca gtgcaccgaa tcctgtacaa
1021 agacaggaac ctccacattc ccaccatgga aaatgggcct gagctgatcc tccgcttcca
1081 gaaggagctg aaggagatcc agtacggaat cagagcccac gagtggatgt tcccggtgtg
1141 aagctgcagg ctgtgctcca gatccaccga cccgtagcat ctcgtcacgc cagcactcgc
1201 ctccctacca atgactcacc tgaagtgcaa tacgaaataa aaggccagcg ggcggcgtct
1261 gggtctctgg cgcccccatg tggttgcgac actcccaaag ccgtaagggc cgacccaggc
1321 atcttggccc ccagcccctc gtcgcgggtt caggtccgcc cattactcct tgtcgtgcgg
1381 tcaaggatac accttggccc cgattccgga tctctccgtt ctcaggccag acccctggtg
1441 ctgccgttga tttttttttc tctgtctttg ctgcaatttt gaaataaaat gccaaagaac
1501 aaaaaaaaaa aaaaaaaaaa aaa
//