LOCUS BC004239 1058 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens jumping translocation breakpoint, mRNA (cDNA clone
MGC:10274 IMAGE:3626047), complete cds.
ACCESSION BC004239
VERSION BC004239.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1058)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1058)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: k Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5729888.
FEATURES Location/Qualifiers
source 1..1058
/db_xref="H-InvDB:HIT000031806"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10274 IMAGE:3626047"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1058
/gene="JTB"
/gene_synonym="B PAR"
/gene_synonym="hJT"
/gene_synonym="HJTB"
/gene_synonym="PAR"
/db_xref="GeneID:10899"
/db_xref="MIM:604671"
CDS 520..873
/gene="JTB"
/gene_synonym="B PAR"
/gene_synonym="hJT"
/gene_synonym="HJTB"
/gene_synonym="PAR"
/codon_start=1
/product="JTB protein"
/protein_id="AAH04239.1"
/db_xref="GeneID:10899"
/db_xref="MIM:604671"
/translation="MAWGWHLSFLSASTSNLPCWLVEEFVVAEECSPCSNFRAKTTPE
CGPTGYVEKITCSSSKRNEFKSCRSALMEQRLFWKFEGAVVCVALIFACLVIIRQRQL
DRKALEKVRKQIESI"
BASE COUNT 240 a 269 c 300 g 249 t
ORIGIN
1 accgaacgcc cccgggaaca ccgggccccg agctcggtcc cgcgcccgag gatcctccac
61 ggggctagat ggctgcgtcg ggggcgggag cggaggcaac tccggccttc cctgccctga
121 cctggaacct ctgggagggc tgcagagtaa gtgccgcctc tgcgctccga cggaggcacg
181 aggcctgtgg agtaggtccc tctgttccga caggtgcgac acttggcgct ccatgcttgc
241 gggtgccggg aggcctggcc tcccccaggg ccgccacctc tgctggttgc tctgtgcttt
301 caccttaaag ctctgccaag cagaggctcc cgtgcaggaa gagaagctgt caggtgggtg
361 attgtctggg aacccgacac gtcccgtcgt ttgtttttgg ttttagtatc ttccccatat
421 accaagagca caggtggaaa aggccggcac cacatggaat gagggcaagc gctgtgccgg
481 gaagttggat gggcagagcc tgggagaaat gttttctgaa tggcctgggg ctggcattta
541 tctttccttt cagcaagcac ctcaaatttg ccatgctggc tggtggaaga gtttgtggta
601 gcagaagagt gctctccatg ctctaatttc cgggctaaaa ctacccctga gtgtggtccc
661 acaggatatg tagagaaaat cacatgcagc tcatctaaga gaaatgagtt caaaagctgc
721 cgctcagctt tgatggaaca acgcttattt tggaagttcg aaggggctgt cgtgtgtgtg
781 gccctgatct tcgcttgtct tgtcatcatt cgtcagcgac aattggacag aaaggctctg
841 gaaaaggtcc ggaagcaaat cgagtccata tagctacatt ccacccttgt atcctgggtc
901 ttagagaccc tatctcagac agtgaaagtg aaatggactg atttgcactc ttggttcttt
961 ggagccttgt ggtggaatcc ccttttcccc atcttcttct ttcagatcat taatgagcag
1021 aataaaaaga gtaaaatggt aaaaaaaaaa aaaaaaaa
//