LOCUS BC004226 1590 bp mRNA linear HUM 06-JUL-2005
DEFINITION Homo sapiens GIPC PDZ domain containing family, member 1, mRNA
(cDNA clone IMAGE:3538778), partial cds.
ACCESSION BC004226
VERSION BC004226.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1590)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1590)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004226.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: m Column: 16.
FEATURES Location/Qualifiers
source 1..1590
/db_xref="H-InvDB:HIT000031797"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3538778"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1590
/gene="GIPC1"
/gene_synonym="GIPC"
/gene_synonym="GLUT1CBP"
/gene_synonym="Hs.6454"
/gene_synonym="IIP-1"
/gene_synonym="MGC15889"
/gene_synonym="MGC3774"
/gene_synonym="NIP"
/gene_synonym="SEMCAP"
/gene_synonym="SYNECTIIN"
/gene_synonym="TIP-2"
/db_xref="GeneID:10755"
/db_xref="MIM:605072"
CDS <1..904
/gene="GIPC1"
/gene_synonym="GIPC"
/gene_synonym="GLUT1CBP"
/gene_synonym="Hs.6454"
/gene_synonym="IIP-1"
/gene_synonym="MGC15889"
/gene_synonym="MGC3774"
/gene_synonym="NIP"
/gene_synonym="SEMCAP"
/gene_synonym="SYNECTIIN"
/gene_synonym="TIP-2"
/codon_start=2
/product="GIPC1 protein"
/protein_id="AAH04226.2"
/db_xref="GeneID:10755"
/db_xref="MIM:605072"
/translation="PLGGGGSGGPQMGLPPPPPALRPRLVFHTQLAHGSPTGRIEGFT
NVKELYGKIAEAFRLPTAEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHVKGQRKEVE
VFKSEDALGLTITDNGAGYAFIKRIKEGSVIDHIHLISVGDMIEAINGQSLLGCRHYE
VARLLKELPRGRTFTLKLTEPRKAFDMISQRSAGGRPGSGPQLGTGRGTLRLRSRGPA
TVEDLPSAFEEKAIEKVDDLLESYMGIRDTELAATMVELGKDKRNPDELAEALDERLG
DFAFPDEFVFDVWGAIGDAKVGRY"
BASE COUNT 315 a 515 c 482 g 278 t
ORIGIN
1 gcctctgggc ggaggtgggt cggggggccc ccaaatgggc ttgccccccc ctcccccagc
61 cctgcggccc cgcctcgtgt tccacaccca gctggcccat ggcagtccca ctggccgcat
121 cgagggcttc accaacgtca aggagctgta tggcaagatc gccgaggcct tccgcctgcc
181 aactgccgag gtgatgttct gcaccctgaa cacccacaaa gtggacatgg acaagctcct
241 ggggggccag atcgggctgg aggacttcat cttcgcccac gtgaaggggc agcgcaagga
301 ggtggaggtg ttcaagtcgg aggatgcact cgggctcacc atcacggaca acggggctgg
361 ctacgccttc atcaagcgca tcaaggaggg cagcgtgatc gaccacatcc acctcatcag
421 cgtgggcgac atgatcgagg ccattaacgg gcagagcctg ctgggctgcc ggcactacga
481 ggtggcccgg ctgctcaagg agctgccccg aggccgtacc ttcacgctga agctcacgga
541 gcctcgcaag gccttcgaca tgatcagcca gcgttcagcg ggtggccgcc ctggctctgg
601 cccacaactg ggcactggcc gagggaccct gcggctccga tcccggggcc ccgccacagt
661 ggaggatctg ccctctgcct ttgaagagaa ggccattgaa aaggtggatg acctgctgga
721 gagttacatg ggtatcaggg acacggagct ggcggccacc atggtggagc tgggaaagga
781 caaaaggaac ccggatgagc tggccgaggc cctggacgaa cggctgggtg actttgcctt
841 ccctgacgag ttcgtctttg acgtctgggg cgccattggg gacgccaagg tcggccgcta
901 ctaggactgc ccccggaccc tgcgatgatg acccgggcgc aacctggtgg gggcccccag
961 cagggacact gacgtcagga cccgagcctc cagcctgagc ctagctcagc agcccaagga
1021 cgatggtgag gggaggtggg gccaggcccc ctgccccgct ccaatcggta ccatcccctc
1081 cctggttccc agtctggccg gggtccccgg cccccctgtg ccctgttccc cacctacctc
1141 agctgggtca ggcacaggga ggggagggat cagccaaatt gggcggccac ccccgcctcc
1201 accactttcc accatcagct gccaaactgg tccctctgtc tccctggggc cttgggttct
1261 gtttgggggt catgaccttc ctagtttcct gacgcaggga atacagggga gagggttgtc
1321 cttcccccca gcaaatgcaa taatgccctc acccctcctg agaggagccc cctccctgtg
1381 gagcctgtta cctccgcatt tgacacgagt ctgctgtgaa ccccgcaacc tcctccccac
1441 ctcccatctc tccttccagg cccatccctg gcccagagca ggagggaggg agggacgatg
1501 gcggtgggtt tttgtatctg aatttgctgt cttgaacata aagaatctat ctgctgttaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//