LOCUS BC004204 1669 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens RNA binding motif protein 42, mRNA (cDNA clone
MGC:3845 IMAGE:3532802), complete cds.
ACCESSION BC004204
VERSION BC004204.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1669)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1669)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004204.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: j Column: 15.
FEATURES Location/Qualifiers
source 1..1669
/db_xref="H-InvDB:HIT000031779"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3845 IMAGE:3532802"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1669
/gene="RBM42"
/db_xref="GeneID:79171"
/db_xref="HGNC:HGNC:28117"
CDS 77..1519
/gene="RBM42"
/codon_start=1
/product="RNA binding motif protein 42"
/protein_id="AAH04204.1"
/db_xref="GeneID:79171"
/db_xref="HGNC:HGNC:28117"
/translation="MAGAGPAPGLPGAGGPVVPGPGAGIPGKSGEERLKEMEAEMALF
EQEVLGAPVPGIPTAVPAVPTVPTVPTVEAMQVPAAPVIRPIIATNTYQQVQQTLEAR
AAAAATVVPPMVGGPPFVGPVGFGPGDRSHLDSPEAREAMFLRRAAVAPQRAPILRPA
FVPHVLQRADSALSSAAAGPRPMALRPPHQALVGPPLPGPPGPPMMLPPMARAPGPPL
GSMAALRPPLEEPAAPRELGLGLGLGLKEKEEAVVAAAAGLEEASAAVAVGAGGAPAG
PAVIGPSLPLALAMPLPEPEPLPLPLEVVRGLLPPLRIPELLSLRPRPRPPRPEPPPG
LMALEVPEPLGEDKKKGKPEKLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEV
NDDILARAFSRFPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRAMREMNGKYVGSR
PIKLRKSMWKDRNLDVVRKKQKEKKKLGLR"
BASE COUNT 322 a 545 c 527 g 275 t
ORIGIN
1 ggggagagta gacagcagaa ccagcggcgg cggctaagca gagactgtag tagcggcgac
61 agcgacgacg gcagcgatgg ctggggcggg gccagccccg ggactcccgg gtgcaggagg
121 acccgtggtc ccgggtcctg gcgctggcat cccgggcaaa agcggcgagg aacgcttgaa
181 ggaaatggag gcggagatgg ccctgtttga gcaggaagtt ctgggggctc cagtacctgg
241 aatcccaact gctgtgcctg cggtgcccac tgtccccacg gtccccacag tagaagcgat
301 gcaggtccca gcggctcctg tgatccgccc aattatcgcg accaacacat accagcaggt
361 ccagcagact ctggaggccc gagcagctgc tgcagccaca gtagttcctc ccatggtggg
421 tggccctcct tttgtaggcc ctgttggctt tggccctggt gatcggagtc acctggacag
481 cccagaggct cgagaagcca tgttcctgcg gcgggcagct gtggcccccc agagggcccc
541 tatcctgcgt ccagccttcg tcccccacgt gctacagaga gcagattccg ctctctcctc
601 tgcagcagcc ggcccccgcc ctatggccct acggccccct caccaggccc tcgtgggccc
661 ccctctgcct gggccccctg gaccacccat gatgctgcca ccaatggctc gggctccagg
721 gcccccgctg ggctccatgg ctgcactgag gccccctctg gaagagccag cagcaccccg
781 agagctgggc ctaggcctgg ggttgggcct gaaagagaag gaagaggcag tggtggcggc
841 ggcggctggg ctggaggagg ctagcgcggc tgtggccgtg ggggcaggag gtgccccagc
901 tggccctgca gtcattgggc ccagcctgcc gctggccctg gccatgccat tgcccgagcc
961 tgagcccctg cccctcccgt tggaggtcgt ccgcggcctc ctgcccccgc tgcgcattcc
1021 tgaactcctg tccctgcgtc ctcggccccg gccccctcgg ccagagccac ccccaggcct
1081 catggctctt gaggtcccag agcccctggg tgaagacaag aagaagggga agccagagaa
1141 attgaaacgg tgcattcgca cagcggcagg gagcagctgg gaggacccca gcctgctgga
1201 gtgggatgca gatgacttcc ggatcttctg tggggatctg ggcaatgagg tgaacgatga
1261 catcttggca cgcgccttca gccgcttccc atccttcctt aaggccaagg tgatccgtga
1321 caagcgcaca ggcaagacca agggctacgg cttcgtcagc ttcaaggacc ccagcgacta
1381 cgtgcgcgcc atgcgtgaga tgaatgggaa gtatgtgggc tcgcgcccca tcaagcttcg
1441 caagagcatg tggaaggacc ggaatctgga cgtggtccgc aagaagcaga aggaaaagaa
1501 gaagctgggc ctgagatagg gtctgtggcc aggcacccgc tcccacctgg ccgggcgctg
1561 gctcctccct cagttctctt tggaaaaccc ccagctgtcc acccatcccc tgccccaaaa
1621 ccagtttcaa taaatttacg ttcatttcca aaaaaaaaaa aaaaaaaaa
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