LOCUS BC004172 1835 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens alanyl-tRNA synthetase domain containing 1, mRNA (cDNA clone MGC:2744 IMAGE:2823004), complete cds. ACCESSION BC004172 VERSION BC004172.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1835) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1835) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC004172.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 2 Row: f Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147388. FEATURES Location/Qualifiers source 1..1835 /db_xref="H-InvDB:HIT000031753" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2744 IMAGE:2823004" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1835 /gene="AARSD1" /gene_synonym="MGC2744" /db_xref="GeneID:80755" /db_xref="HGNC:HGNC:28417" CDS 146..1723 /gene="AARSD1" /gene_synonym="MGC2744" /codon_start=1 /product="alanyl-tRNA synthetase domain containing 1" /protein_id="AAH04172.1" /db_xref="GeneID:80755" /db_xref="HGNC:HGNC:28417" /translation="MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNS KDSQDKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAH VEHYAELLKKVSTKRPPPAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLED TVLFPEGGGQPDDRGTINDISVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDH MQQHSGQHLITAVADHLFKLKTTSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIR DRLPVNVRELSLDDPEVEQVSGRGLPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQ VIKILGTEKGKKNRTNLIFLSGNRVLKWMERSHGTEKALTALLKCGAEDHVEAVKKLQ NSTKILQKNNLNLLRDLAVHIAHSLRNSPDWGGVVILHRKEGDSEFMNIIANEIGSEE TLLFLTVGDEKGGGLFLLAGPPASVETLGPRVAEVLEGKGAGKKGRFQGKATKMSRRM EAQALLQDYISTQSAKE" BASE COUNT 491 a 396 c 555 g 393 t ORIGIN 1 tggagattcc ctgctccaag tcttctgggc gctccaggtt ctgtgaggcc ccacgggagc 61 cccggacccc tggtctctgt aactgtgggg tgagggaagg cagcacgccc ggaccttgtg 121 gtacgacagg cccaggtatg tgttcatgga gttttgtgtt gaggacagca ccgatgtcca 181 cgtgcttatt gaggatcacc gcattgtgtt cagctgcaag aatgccgatg gagtggagtt 241 gtacaatgag attgagttct atgccaaagt gaactccaag gactcccagg ataagcgctc 301 ttcccgctct attacttgtt ttgtgagaaa atggaaggaa aaggtggcct ggccgcggct 361 taccaaggag gatatcaagc cagtgtggct gtctgtggac tttgataact ggagagactg 421 ggaaggggat gaagagatgg agctggctca tgtggaacat tatgcagagc ttttgaagaa 481 ggtcagcacc aagagacctc cacctgccat ggatgatttg gatttcacca ccaccgtggt 541 ctcttgctgt cccgcggagc tgcagactga agggagcaac ggcaagaaag aagtgctgag 601 cggtttccaa gtggtgctgg aagacacagt gcttttccct gagggcgggg gacagcctga 661 tgaccgtggt acaatcaatg acatctctgt gctgagagtg actcgccgtg gggaacaggc 721 tgatcatttc acccagacac ccctggatcc aggaagccag gttctggtcc gggtagattg 781 ggagcggagg tttgaccaca tgcagcagca ttcagggcag catctcatca cggcagttgc 841 tgaccatcta tttaagctga agacaacatc atgggagtta gggagatttc ggagtgcgat 901 tgagctggac accccctcta tgactgcaga gcaagtagct gccattgagc agagcgtcaa 961 tgaaaaaatc agagatcggc tgcctgtgaa tgtccgagaa ctgagcctgg atgatcctga 1021 ggtggagcag gtgagtggcc ggggtttgcc tgatgatcat gctgggccca ttcgggttgt 1081 taacatcgag ggcgttgatt ccaacatgtg ctgtgggacc catgtgagca atctcagtga 1141 ccttcaggtc attaagattc tgggcactga gaaggggaaa aagaacagaa ccaacctgat 1201 atttctgtct gggaaccggg tgctgaagtg gatggagaga agtcatggaa ctgaaaaagc 1261 actgactgct ctgcttaagt gtggagcaga ggatcatgtg gaagcagtga aaaagctcca 1321 gaactccacc aagatcctgc agaagaataa cctgaatctg ctcagagacc tggctgtgca 1381 cattgcccat agcctcagga acagtccaga ctggggaggt gtggtcatat tacacaggaa 1441 ggagggtgat tcagagttca tgaatatcat tgccaatgag attgggtcag aggagaccct 1501 cctgttctta actgtgggcg atgagaaagg tggtggactc ttcttactgg cagggccacc 1561 tgcgtctgtg gagaccctgg ggcccagggt ggctgaggtc ctggaaggca aaggagcagg 1621 gaagaaaggc cgttttcagg gcaaggccac caagatgagc cggcggatgg aggcgcaggc 1681 gcttctccag gactacatca gcacgcagag tgctaaggag tgagggctta gggcactcac 1741 ctcctgtttc cacaggaatc ttttggtcaa taaaatagat tgactcagaa aaaaaaaaaa 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //