LOCUS BC004155 1053 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 5, mRNA (cDNA clone MGC:2407
IMAGE:2822537), complete cds.
ACCESSION BC004155
VERSION BC004155.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1053)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1053)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC004155.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34305290.
FEATURES Location/Qualifiers
source 1..1053
/db_xref="H-InvDB:HIT000031739_08"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2407 IMAGE:2822537"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1053
/gene="RNF5"
/gene_synonym="RING5"
/gene_synonym="RMA1"
/db_xref="GeneID:6048"
/db_xref="HGNC:HGNC:10068"
/db_xref="MIM:602677"
CDS 5..547
/gene="RNF5"
/gene_synonym="RING5"
/gene_synonym="RMA1"
/codon_start=1
/product="ring finger protein 5"
/protein_id="AAH04155.1"
/db_xref="GeneID:6048"
/db_xref="HGNC:HGNC:10068"
/db_xref="MIM:602677"
/translation="MAAAEEEDGGPEGPNRERGGAGATFECNICLETAREAVVSVCGH
LYCWPCLHQWLETRPERQECPVCKAGISREKVVPLYGRGSQKPQDPRLKTPPRPQGQR
PAPESRGGFQPFGDTGGFHFSFGVGAFPFGFFTTVFNAHEPFRRGTGVDLGQGHPASS
WQDSLFLFLAIFFFFWLLSI"
BASE COUNT 245 a 271 c 269 g 268 t
ORIGIN
1 ggccatggca gcagcggagg aggaggacgg gggccccgaa gggccaaatc gcgagcgggg
61 cggggcgggc gcgaccttcg aatgtaatat atgtttggag actgctcggg aagctgtggt
121 cagtgtgtgt ggccacctgt actgttggcc atgtcttcat cagtggctgg agacacggcc
181 agaacggcaa gagtgtccag tatgtaaagc tgggatcagc agagagaagg ttgtcccgct
241 ttatgggcga gggagccaga agccccagga tcccagatta aaaactccac cccgccccca
301 gggccagaga ccagctccgg agagcagagg gggattccag ccatttggtg ataccggggg
361 cttccacttc tcatttggtg ttggtgcttt tccctttggc tttttcacca ccgtcttcaa
421 tgcccatgag cctttccgcc ggggtacagg tgtggatctg ggacagggtc acccagcctc
481 cagctggcag gattccctct tcctgtttct cgccatcttc ttcttttttt ggctgctcag
541 tatttgagct atgtctgctt cctgcccacc tccagccaga gaagaatcag tattgagggt
601 ccctgctgac ccttccgtac tcctggaccc ccttgacccc tctatttctg ttggctaagg
661 ccagccctgg acattgtcca ggaaggcctg gggaggagga gtgaagtctg tgcatagatg
721 ggagagcctt ctgctcagag gctcactcag taacgttgtt taattctctg ccctggggaa
781 ggaggatgga ttgagagaat gtctttctcc tctcctaagt ctttgctttc cctgatttct
841 tgatttgatc ttcaaaggtg ggcaaagttc cctctgactc ttcccccact ccccatctta
901 ctgatttaat ttaatttttc actccccaga gtctaatatg gattctgact cttaagtgct
961 tccgccccct cactacctcc tttaatacaa attcaataaa aaaggtgaaa tataaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//