LOCUS BC004104 1415 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2D 4 (putative), mRNA
(cDNA clone MGC:10513 IMAGE:3835609), complete cds.
ACCESSION BC004104
VERSION BC004104.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1415)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1415)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC004104.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19549332.
FEATURES Location/Qualifiers
source 1..1415
/db_xref="H-InvDB:HIT000031706"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10513 IMAGE:3835609"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1415
/gene="UBE2D4"
/gene_synonym="HBUCE1"
/db_xref="GeneID:51619"
/db_xref="HGNC:HGNC:21647"
CDS 90..533
/gene="UBE2D4"
/gene_synonym="HBUCE1"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2D 4 (putative)"
/protein_id="AAH04104.1"
/db_xref="GeneID:51619"
/db_xref="HGNC:HGNC:21647"
/translation="MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSP
YQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKV
LLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKYAM"
BASE COUNT 355 a 399 c 334 g 327 t
ORIGIN
1 cggcgtgcag cttggtggcg gctgagccgg cagcgggccg cctcaggcag ccccggccgg
61 gccgcccggg tccccggcag cggggtagga tggcgctaaa gcggatccag aaggaattaa
121 ccgacttgca gagggatcct cctgcccagt gttctgcagg acctgtcggt gatgacttgt
181 tccactggca ggccaccatc atgggcccga atgacagtcc ttaccaagga ggtgttttct
241 tcctgaccat ccactttcct acagattacc cgttcaagcc cccaaaggtt gctttcacaa
301 ccaaaattta tcaccctaat atcaacagca atggcagcat ctgccttgat atcctgcggt
361 ctcagtggtc tccagcgttg actgtgtcaa aagttctctt gtccatctgc tcgctgctct
421 gcgaccccaa ccccgatgac cccctggtgc cagagatagc acacacctac aaggccgaca
481 gagagaagta caacagacta gcaagagagt ggacacaaaa atatgctatg taagtgcctt
541 ggaggtttta catgagacac tgtccaagag aagctggcag agaggtcttc ccttaaaact
601 ttgggctgtt ggctgagcca ttcaaagagc atcatctgtt cttcaaacaa atgttggtca
661 cccactctct ccagctgcag catgttggtg ccattttcag caattacggc tttgacagtg
721 ccacctcttt gatgccaaat cagcaaccat tgttgttatg atctgcagtc ttcctggtga
781 cactggaatc tctctctctg ccgcctcagt ttgtctgctg gtctcttggg gggccaggcc
841 ctgcacgtct ctcctacccg gcctcaaatg gtgctgctgc ccatgatggt accacaccag
901 ggcctcagcc tggcccctca ccacataccc tttgcctttt agaactcagt gccatcctgg
961 gtgcccaggg cagagcaggc tttgttcgca cctcatctgc tgcagaacca catcctgagg
1021 agtctcagct tatcctggag ggaattggga acagtgtcac tgggaagtga aggcctagcc
1081 ctgtggcttc caccagtctc ctcctgcagt gccacgtggt ggcatttctc gcctcacacc
1141 aagaagcagc aagtggaaaa tttcaggata caaagcacat aacaccccat aagagatgat
1201 tatgttttta gaagcaagag caaaattatg aaacctctag agatttgggt catgttactc
1261 catttgatga agattctcac taccgcccgc tcctcccata ggagcctaca ctaagtccaa
1321 gtgtgagcca ttcacagact agaacacaag gagggagaga gactcttaaa cgtaaataaa
1381 aatgcaattc actcacaaaa aaaaaaaaaa aaaaa
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