LOCUS BC003685 1299 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens paired-like homeodomain 1, mRNA (cDNA clone MGC:5147 IMAGE:3452956), complete cds. ACCESSION BC003685 VERSION BC003685.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1299) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1299) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (28-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 4 Row: e Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24234701. FEATURES Location/Qualifiers source 1..1299 /db_xref="H-InvDB:HIT000031696" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5147 IMAGE:3452956" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1299 /gene="PITX1" /gene_synonym="POTX" /gene_synonym="PTX1" /db_xref="GeneID:5307" /db_xref="HGNC:HGNC:9004" /db_xref="MIM:602149" CDS 135..1079 /gene="PITX1" /gene_synonym="POTX" /gene_synonym="PTX1" /codon_start=1 /product="PITX1 protein" /protein_id="AAH03685.1" /db_xref="GeneID:5307" /db_xref="HGNC:HGNC:9004" /db_xref="MIM:602149" /translation="MDAFKGGMSLERLPEGLRPPPPPPHDMGPAFHLARPADPREPLE NSASESSDTELPEKERGGEPKGPEDSGAGGTGCGGADDPAKKKKQRRQRTHFTSQQLQ ELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRRAKWRKRERNQQLDLCKGGY VPQFSGLVQPYEDVYAAGYSYNNWAAKSLAPAPLSTKSFTFFNSMSPLSSQSMFSAPS SISSMTMPSSMGPGAVPGMPNSGLNNINNLTGSSLNSAMSPGACPYGTPASPYSVYRD TCNSSLASLRLKSKQHSSFGYGALQGPASGLNACQYNS" BASE COUNT 252 a 477 c 400 g 170 t ORIGIN 1 ctggggactt cgaggcggcc gagacgggag ttgattctag gcgaaacaag tcatttgagg 61 cctgaggtcg cagccagggc ggcggggcgc gcccagcccc ggcccctgga gcgcccgccg 121 cggtccccac ctccatggac gccttcaagg ggggcatgag cctggagcgg ctgccggagg 181 ggctccggcc gccgccgccg ccaccccatg acatggggcc cgccttccac ctggcccggc 241 ccgccgaccc ccgcgagccg ctcgagaact ccgccagcga gtcgtctgac acggagctgc 301 cagagaagga gcgcggcggg gaacccaagg ggcccgagga cagtggtgcg ggaggcacgg 361 gctgcggcgg cgcagacgac ccagccaaga agaagaagca gcggcggcaa cgtacgcact 421 tcacaagcca gcagttgcaa gagctagagg ccacgttcca gaggaaccgc taccccgaca 481 tgagcatgag ggaggagatc gccgtgtgga ccaacctcac cgagccgcgc gtgcgggtct 541 ggttcaagaa ccggcgagcc aagtggcgta agcgcgagcg taaccagcag ctggacctgt 601 gcaagggtgg ctacgtgccg cagttcagcg gcctagtgca gccctacgag gacgtgtacg 661 ccgccggcta ctcctacaac aactgggccg ccaagagcct ggcgccagcg ccgctctcca 721 ccaagagctt caccttcttc aactccatga gcccgctgtc gtcgcagtcc atgttctcag 781 cacccagctc catctcctcc atgaccatgc cgtccagcat gggcccaggc gccgtgcctg 841 gcatgcccaa ctcgggcctc aacaacatca acaacctcac cggctcctcg ctcaactcgg 901 ccatgtcgcc gggcgcttgc ccgtacggca ctcccgcctc gccctacagc gtctaccggg 961 acacgtgcaa ctcgagccta gccagcctgc ggctcaagtc caaacagcac tcgtcgtttg 1021 gctacggcgc cctgcagggc ccggcctcgg gcctcaacgc gtgccagtac aacagctgac 1081 cgccccgccg caccacgcgg gccggcggcc ggagcgggga agggcgcggg cgcggaggac 1141 gcacgcgggg ccccggctcg caagccccag ctcaccgcgc cgcggacctc acacctgcgc 1201 agccccctcc tcccacttcc cactccgggt tggttttgtg tttgcttttc cggaccccac 1261 tctgccctcc aaaaagacaa aaaaaaaaaa aaaaaaaaa //