LOCUS BC003648 2448 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens chromosome 4 open reading frame 15, mRNA (cDNA clone
MGC:4701 IMAGE:3534250), complete cds.
ACCESSION BC003648
VERSION BC003648.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2448)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2448)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC003648.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2448
/db_xref="H-InvDB:HIT000031670"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4701 IMAGE:3534250"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2448
/gene="C4orf15"
/gene_synonym="IT1"
/gene_synonym="MGC4701"
/db_xref="GeneID:79441"
CDS 909..2345
/gene="C4orf15"
/gene_synonym="IT1"
/gene_synonym="MGC4701"
/codon_start=1
/product="C4orf15 protein"
/protein_id="AAH03648.1"
/db_xref="GeneID:79441"
/translation="MASVTSHKSLRLNAKEEEATKKLKQSQGILNAMITKISNELQAL
TDEVTQLMMFFRHSNLGQGTNPLVFLSQFSLEKYLSQEEQSTAALTLYTKKQFFQGIH
EVVESSNEDNFQLLDIQTPSICDNQEILEERRLEMARLQLAYICAQHQLIHLKASNSS
MKSSIKWAEESLHSLTSKAVDKENLDAKISSLTSEIMKLEKEVTQIKDRSLPAVVREN
AQLLNMPVVKGDFDLQIAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRDI
YRQLENLVQELSQSNMMLYKQLEMLTDPSVSQQINPRNTIDTKDYSTHRLYQVLEGEN
KKKELFLTHGNLEEVAEKLKQNISLVQDQLAVSAQEHSFFLSKRNKDVDMLCDTLYQG
GNQLLLSDQELTEQFHKVESQLNKLNHLLTDILADVKTKRKTLANNKLHQMEREFYVY
FLKDEDYLKDIVENLETQSKIKAVSLED"
BASE COUNT 806 a 418 c 554 g 670 t
ORIGIN
1 gtcgccttgt gcgcttgcgc gcgtccaggc gctcccgtga ggcagtgcga ggcgcgcggg
61 gcacggaggg cggtggcggc gggctcctgc gagaagcaag cggaacttcc tgagcgtgct
121 taggtgtcac agctgggtga ccctccgaag gaaggttttg ccgctggcgc gtctggtgta
181 tcgcggcctt ggggccgcgg atccctgggg cttgccgctg cctctggggt tcgcgcggcc
241 ctggcgtcgg ggctgcctca gcgctggctg aaggccggcc cgaagcaccc ttaattgtgg
301 ccgcgcgctt ccctgctgct cctgctgttc tccgcgtcgc ggtggtggac tctggaggtg
361 gagccttgcc cggcgagacg ttgaggagga atcattatag attctaaaaa tatattttcc
421 cttctctgtg gacttggtat aaaacgtagc tttttttctg cttggattta ttttctaaaa
481 atcaacaccg taaacccata tcagatacaa caaaattggg gtagttaaaa ccatgagttg
541 tggaaatgag tttgtggaaa cattaaaaaa aaattggtta tcccaaagct gataatctta
601 atggagaaga ctttgactgg ttgtttgagg gcgttgaaga tgaatcgttt ctgaagtggt
661 tttgtgggaa tgtgaatgaa cagaacgtgt tgtctgaaag agaattggaa gcttttagca
721 ttcttcagaa atcaggcaag cctattctag aaggggcggc attggatgaa gctcttaaaa
781 cgtgtaaaac ttctgatttg aagacaccta gactggatga taaagagctg gagaaattag
841 aggatgaggt tcaaactcta ctgaaattaa agaacctaaa aattcagcga cgtaataaat
901 gtcaattgat ggcttcagta actagccaca aatctctgag gttaaatgct aaagaagaag
961 aagccactaa aaagctgaag cagagtcaag gaattctaaa tgcaatgatc actaagatca
1021 gtaatgaact tcaggctctt actgatgaag ttacacaatt gatgatgttc ttcagacatt
1081 ctaatttagg tcaagggaca aatccactgg tatttttatc gcaattttcc ttggaaaaat
1141 acctaagtca ggaagagcaa agcacagcag cattaacttt gtataccaaa aaacagttct
1201 ttcagggtat acatgaagta gttgaaagtt caaatgaaga caattttcaa cttttagata
1261 tacagacacc atctatttgt gataatcaag aaatccttga ggagagacga ctagagatgg
1321 ctagactgca gctcgcatac atttgtgctc aacatcagtt aattcactta aaagcaagta
1381 attcgagcat gaagtcaagt ataaaatggg cagaggagag tcttcacagc ctaaccagca
1441 aggctgtgga caaagaaaat ttggatgcta aaatttctag cttgaccagt gagattatga
1501 aacttgaaaa agaggtcact caaataaaag acagaagttt acctgctgtg gtaagagaga
1561 atgcccagtt attgaatatg ccagtggtaa agggagattt tgatctgcag attgctaaac
1621 aagattatta tacagcaaga caagagttag ttttaaatca attaataaaa caaaaggcat
1681 catttgaact tctacagtta tcatatgaaa ttgaattaag aaagcatcgg gacatatatc
1741 gtcaacttga aaatttggtt caagaactta gtcaaagtaa catgatgctc tacaagcaat
1801 tagaaatgtt aacagatcca tcagtttctc aacagataaa tccaaggaat accattgata
1861 ctaaggatta ttctactcat aggctttacc aagttttgga gggagagaat aagaaaaaag
1921 aattgtttct aactcatgga aaccttgagg aagtggctga gaaattgaaa cagaatattt
1981 ctttagtaca agatcagttg gcagtatctg ctcaagaaca ttctttcttt ctgtccaaac
2041 ggaataagga tgtggacatg ctttgtgata ctttgtatca aggaggaaat cagcttttgc
2101 ttagtgatca ggagttaaca gagcagtttc ataaagttga atctcaactg aataagctaa
2161 atcatctcct cactgatatt cttgctgatg tgaagacaaa aagaaaaact ttggcaaata
2221 ataaattaca tcaaatggaa agagaattct atgtatattt tttaaaagat gaagattatc
2281 tgaaagatat tgtggagaat ttagaaactc aatcaaagat taaggctgtt agtcttgaag
2341 attgaaaatt actgaaaact gaatctttat tacgtgtcct cttttattta ttagaagact
2401 gtgtataata aacactacta aatttttaaa aaaaaaaaaa aaaaaaaa
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