LOCUS BC003637 956 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DNA-damage-inducible transcript 3, mRNA (cDNA clone
MGC:4154 IMAGE:3530545), complete cds.
ACCESSION BC003637
VERSION BC003637.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 956)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 956)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC003637.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: m Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50345277.
FEATURES Location/Qualifiers
source 1..956
/db_xref="H-InvDB:HIT000031662"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4154 IMAGE:3530545"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..956
/gene="DDIT3"
/gene_synonym="CEBPZ"
/gene_synonym="CHOP"
/gene_synonym="CHOP10"
/gene_synonym="GADD153"
/gene_synonym="MGC4154"
/db_xref="GeneID:1649"
/db_xref="HGNC:HGNC:2726"
/db_xref="MIM:126337"
CDS 182..691
/gene="DDIT3"
/gene_synonym="CEBPZ"
/gene_synonym="CHOP"
/gene_synonym="CHOP10"
/gene_synonym="GADD153"
/gene_synonym="MGC4154"
/codon_start=1
/product="DNA-damage-inducible transcript 3"
/protein_id="AAH03637.1"
/db_xref="GeneID:1649"
/db_xref="HGNC:HGNC:2726"
/db_xref="MIM:126337"
/translation="MAAESLPFSFGTLSSWELEAWYEDLQEVLSSDENGGTYVSPPGN
EEEESKIFTTLDPASLAWLTEEEPEPAEVTSTSQSPHSPDSSQSSLAQEEEEEDQGRT
RKRKQSGHSPARAGKQRMKEKEQENERKVAQLAEENERLKQEIERLTREVEATRRALI
DRMVNLHQA"
BASE COUNT 318 a 213 c 244 g 181 t
ORIGIN
1 gagagagaga gacttaagtc taaggcactg agcgtatcat gttaaagatg agcgggtggc
61 agcgacagag ccaaaatcag agctggaacc tgaggagaga gtgttcaaga aggaagtgta
121 tcttcataca tcaccacacc tgaaagcaga tgtgcttttc cagactgatc caactgcaga
181 gatggcagct gagtcattgc ctttctcctt tgggacactg tccagctggg agctggaagc
241 ctggtatgag gacctgcaag aggtcctgtc ttcagatgaa aatgggggta cctatgtttc
301 acctcctgga aatgaagagg aagaatcaaa aatcttcacc actcttgacc ctgcttctct
361 ggcttggctg actgaggagg agccagaacc agcagaggtc acaagcacct cccagagccc
421 tcactctcca gattccagtc agagctccct ggctcaggag gaagaggagg aagaccaagg
481 gagaaccagg aaacggaaac agagtggtca ttccccagcc cgggctggaa agcagcgcat
541 gaaggagaaa gaacaggaga atgaaaggaa agtggcacag ctagctgaag agaatgaacg
601 gctcaagcag gaaatcgagc gcctgaccag ggaagtagag gcgactcgcc gagctctgat
661 tgaccgaatg gtgaatctgc accaagcatg aacaattggg agcatcagtc ccccacttgg
721 gccacactac ccacctttcc cagaagtggc tactgactac cctctcacta gtgccaatga
781 tgtgaccctc aatcccacat acgcaggggg aaggcttgga gtagacaaaa ggaaaggtct
841 cagcttgtat atagagattg tacatttatt tattactgtc cctatctatt aaagtgactt
901 tctatgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//