LOCUS BC003605 1372 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens single stranded DNA binding protein 3, mRNA (cDNA
clone MGC:977 IMAGE:3546126), complete cds.
ACCESSION BC003605
VERSION BC003605.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1372)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1372)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58218978.
FEATURES Location/Qualifiers
source 1..1372
/db_xref="H-InvDB:HIT000031634"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:977 IMAGE:3546126"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1372
/gene="SSBP3"
/gene_synonym="CSDP"
/gene_synonym="FLJ10355"
/gene_synonym="SSDP"
/gene_synonym="SSDP1"
/db_xref="GeneID:23648"
/db_xref="HGNC:HGNC:15674"
/db_xref="MIM:607390"
CDS 27..1133
/gene="SSBP3"
/gene_synonym="CSDP"
/gene_synonym="FLJ10355"
/gene_synonym="SSDP"
/gene_synonym="SSDP1"
/codon_start=1
/product="single stranded DNA binding protein 3"
/protein_id="AAH03605.1"
/db_xref="GeneID:23648"
/db_xref="HGNC:HGNC:15674"
/db_xref="MIM:607390"
/translation="MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEI
RWEKNITLGEPPGFLHSWWCVFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVL
GNIPPNDGMPGGPIPPGFFQGPPGSQPSPHAQPPPHNPSSMMGPHSQPPGGVPGTQPL
LPNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNYGSGMRPPPNSLGPAMPGIN
MGPGAGRPWPNPNSANSIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYT
MINPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGDIDGLPKNSPNNISGI
SNPPGTPRDDGELGGNFLHSFQNDNYSPSMTMSV"
BASE COUNT 357 a 413 c 331 g 271 t
ORIGIN
1 gctcggcgcc ctcttccctg caaaccatgt ttgccaaagg caaaggctcg gcggtgccct
61 cggatgggca ggctcgggaa aagttagctt tatacgtcta cgaatattta ctgcacgtag
121 gagcacagaa atctgcacag accttcttat cggagattcg atgggaaaaa aacatcacgt
181 tgggagaacc gcctgggttt ttgcactcgt ggtggtgtgt attttgggac ctttactgtg
241 cagctcctga aaggagagac acttgtgaac attcaagtga agcaaaagcc tttcatgatt
301 atagtgcagc agctgccccg agccccgtgc ttggcaacat tccccccaac gatgggatgc
361 cgggaggccc catcccgcca ggtttctttc agggtcctcc ggggtcacag ccctcgccgc
421 acgcacagcc tccacctcac aatcctagca gcatgatggg accccacagt cagcctccgg
481 gaggagttcc tgggacacag ccattgctgc ccaattctat ggatcccaca cgacaacaag
541 gccaccccaa catgggagga tcaatgcaga gaatgaaccc tccccgaggc atggggccca
601 tgggtcccgg cccacagaat tacggcagcg gcatgagacc accacccaac tccctcggcc
661 ccgccatgcc cgggattaac atgggcccgg gagctggcag accctggccc aatcctaaca
721 gtgctaactc aattccatac tcctcctcat cacctggtac ctatgtggga ccccctggtg
781 gtggcggtcc tccaggaaca cccattatgc ccagtcccgc agattcaaca aattccagtg
841 acaacatcta cacaatgatt aatccagtgc cgcctggagg cagccggtcc aacttcccga
901 tgggtcccgg ctcggacggt ccgatgggcg gcatgggtgg catggagcca caccacatga
961 atggatcatt agggtcaggc gacatagacg gacttccaaa aaattctcct aacaacataa
1021 gtggcattag caatcctcca ggcacccctc gagatgacgg cgagctagga gggaacttcc
1081 tccactcctt tcagaacgac aattattctc caagcatgac gatgagtgtg tgatcccccc
1141 ttctccgaga cgctgagaga gcaggcattg caggcgggaa gatgccagaa attatgcaag
1201 aagtgaggtg tcattatcca ggagctggtg gggagggcat ctccctgctc ccctcaaccc
1261 cctcccaccc catccacgcc ccctaccttt cccaatttta gtttcatgca ataaaaaggc
1321 caaacttttt attccataaa acaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//