LOCUS BC003596 2508 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens tumor protein p53, mRNA (cDNA clone MGC:646 IMAGE:3544714), complete cds. ACCESSION BC003596 VERSION BC003596.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2508) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2508) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: f Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8400737. FEATURES Location/Qualifiers source 1..2508 /db_xref="H-InvDB:HIT000031628" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:646 IMAGE:3544714" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2508 /gene="TP53" /gene_synonym="LFS1" /gene_synonym="p53" /gene_synonym="TRP53" /db_xref="GeneID:7157" /db_xref="HGNC:HGNC:11998" /db_xref="MIM:191170" CDS 121..1302 /gene="TP53" /gene_synonym="LFS1" /gene_synonym="p53" /gene_synonym="TRP53" /codon_start=1 /product="tumor protein p53" /protein_id="AAH03596.1" /db_xref="GeneID:7157" /db_xref="HGNC:HGNC:11998" /db_xref="MIM:191170" /translation="MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLM LSPDDIEQWFTEDPGPDEAPRMPEAAPRVAPAPAAPTPAAPAPAPSWPLSSSVPSQKT YQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAM AIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVV PYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCA CAGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPKKKPLDGEYFTLQIRG RERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEGPDS D" BASE COUNT 544 a 711 c 619 g 634 t ORIGIN 1 ccagggagca ggtagctgct gggctccggg gacactttgc gttcgggctg ggagcgtgct 61 ttccacgacg gtgacacgct tccctggatt ggcagccaga ctgccttccg ggtcactgcc 121 atggaggagc cgcagtcaga tcctagcgtc gagccccctc tgagtcagga aacattttca 181 gacctatgga aactacttcc tgaaaacaac gttctgtccc ccttgccgtc ccaagcaatg 241 gatgatttga tgctgtcccc ggacgatatt gaacaatggt tcactgaaga cccaggtcca 301 gatgaagctc ccagaatgcc agaggctgct ccccgcgtgg cccctgcacc agcagctcct 361 acaccggcgg cccctgcacc agccccctcc tggcccctgt catcttctgt cccttcccag 421 aaaacctacc agggcagcta cggtttccgt ctgggcttct tgcattctgg gacagccaag 481 tctgtgactt gcacgtactc ccctgccctc aacaagatgt tttgccaact ggccaagacc 541 tgccctgtgc agctgtgggt tgattccaca cccccgcccg gcacccgcgt ccgcgccatg 601 gccatctaca agcagtcaca gcacatgacg gaggttgtga ggcgctgccc ccaccatgag 661 cgctgctcag atagcgatgg tctggcccct cctcagcatc ttatccgagt ggaaggaaat 721 ttgcgtgtgg agtatttgga tgacagaaac acttttcgac atagtgtggt ggtgccctat 781 gagccgcctg aggttggctc tgactgtacc accatccact acaactacat gtgtaacagt 841 tcctgcatgg gcggcatgaa ccggaggccc atcctcacca tcatcacact ggaagactcc 901 agtggtaatc tactgggacg gaacagcttt gaggtgcgtg tttgtgcctg tgctgggaga 961 gaccggcgca cagaggaaga gaatctccgc aagaaagggg agcctcacca cgagctgccc 1021 ccagggagca ctaagcgagc actgcccaac aacaccagct cctctcccca gccaaagaag 1081 aaaccactgg atggagaata tttcaccctt cagatccgtg ggcgtgagcg cttcgagatg 1141 ttccgagagc tgaatgaggc cttggaactc aaggatgccc aggctgggaa ggagccaggg 1201 gggagcaggg ctcactccag ccacctgaag tccaaaaagg gtcagtctac ctcccgccat 1261 aaaaaactca tgttcaagac agaagggcct gactcagact gacattctcc acttcttgtt 1321 ccccactgac agcctcccac ccccatctct ccctcccctg ccattttggg ttttgggtct 1381 ttgaaccctt gcttgcaata ggtgtgcgtc agaagcaccc aggacttcca tttgctttgt 1441 cccggggctc cactgaacaa gttggcctgc actggtgttt tgttgtgggg aggaggatgg 1501 ggagtaggac ataccagctt agattttaag gtttttactg tgagggatgt ttgggagatg 1561 taagaaatgt tcttgcagtt aagggttagt ttacaatcag ccacattcta ggtaggggcc 1621 cacttcaccg tactaaccag ggaagctgtc cctcactgtt gaattttctc taacttcaag 1681 gcccatatct gtgaaatgct ggcatttgca cctacctcac agagtgcatt gtgagggtta 1741 atgaaataat gtacatctgg ccttgaaacc accttttatt acatggggtc tagaacttga 1801 cccccttgag ggtgcttgtt ccctctccct gttggtcggt gggttggtag tttctacagt 1861 tgggcagctg gttaggtaga gggagttgtc aagtctctgc tggcccagcc aaaccctgtc 1921 tgacaacctc ttggtgaacc ttagtaccta aaaggaaatc tcaccccatc ccacaccctg 1981 gaggatttca tctcttgtat atgatgatct ggatccacca agacttgttt tatgctcagg 2041 gtcaatttct tttttctttt tttttttttt tttctttttc tttgagactg ggtctcgctt 2101 tgttgcccag gctggagtgg agtggcgtga tcttggctta ctgcagcctt tgcctccccg 2161 gctcgagcag tcctgcctca gcctccggag tagctgggac cacaggttca tgccaccatg 2221 gccagccaac ttttgcatgt tttgtagaga tggggtctca cagtgttgcc caggctggtc 2281 tcaaactcct gggctcaggc gatccacctg tctcagcctc ccagagtgct gggattacaa 2341 ttgtgagcca ccacgtccag ctggaagggt caacatcttt tacattctgc aagcacatct 2401 gcattttcac cccacccttc ccctccttct ccctttttat atcccatttt tatatcgatc 2461 tcttatttta caataaaact ttgctgccaa aaaaaaaaaa aaaaaaaa //