LOCUS BC003586 1188 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens armadillo repeat containing 10, mRNA (cDNA clone
MGC:3195 IMAGE:3357276), complete cds.
ACCESSION BC003586
VERSION BC003586.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1188)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1188)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377662.
FEATURES Location/Qualifiers
source 1..1188
/db_xref="H-InvDB:HIT000031620"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3195 IMAGE:3357276"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1188
/gene="ARMC10"
/gene_synonym="PNAS-112"
/gene_synonym="SVH"
/db_xref="GeneID:83787"
/db_xref="HGNC:HGNC:21706"
CDS 113..1039
/gene="ARMC10"
/gene_synonym="PNAS-112"
/gene_synonym="SVH"
/codon_start=1
/product="ARMC10 protein"
/protein_id="AAH03586.1"
/db_xref="GeneID:83787"
/db_xref="HGNC:HGNC:21706"
/translation="MGGPRGAGWVAAGLLLGAGACYCIYRLTRGRRRGDRELGIRSSK
SAEDLTDGSYDDVLNAEQLQKLLYLLESTEDPVIIERALITLGNNAAFSVNQAIIREL
GGIPIVANKINHSNQSIKEKALNALNNLSVNVENQIKIKIYISQVCEDVFSGSLNSAV
QLAGLTLLTNMTVTNDHQHMLHSYITDLFQVLLTGNGNTKVQVLKLLLNLSENPAMTE
GLLRAQVDSSFLSLYDSHVAKEILLRVLTLFQNIKNCLKIEGHLAVQPTFTEGSLFFL
LHGEECAQKIRALVDHHDAEVKEKVVTIIPKI"
BASE COUNT 332 a 261 c 281 g 314 t
ORIGIN
1 gtcaggtggc gtttgctgtg gcggctaggc ccgcgtgcgc tggagacctc cgcgctggcc
61 cccgcgagcc tcctgccctg gcccggcgct gcggctctgc cgcggcggca gcatgggtgg
121 cccccggggc gcgggctggg tggcggcggg cctgctgctc ggcgcgggcg cctgctactg
181 catttacagg ctgacccggg gtcggcggcg gggcgaccgc gagctcggga tacgctcttc
241 gaagtccgca gaagacttaa ctgatggttc atatgatgat gttctaaatg ctgaacaact
301 tcagaaactc ctttacctgc tggagtcaac ggaggatcct gtaattattg aaagagcttt
361 gattactttg ggtaacaatg cagccttttc agttaaccaa gctattattc gtgaattggg
421 tggtattcca attgttgcaa acaaaatcaa ccattccaac cagagtatta aagagaaagc
481 tttaaatgca ctaaataacc tgagtgtgaa tgttgaaaat caaatcaaga taaagatata
541 catcagtcaa gtatgtgagg atgtcttctc tggttctctg aactctgctg tgcagctggc
601 tggactgaca ttgttgacaa acatgactgt taccaatgac caccagcaca tgcttcacag
661 ttacattaca gacctgttcc aggtgttact tactggaaat ggaaacacga aggtgcaagt
721 tttgaaactg cttttgaatt tgtctgaaaa tccagccatg acagaaggac ttctccgtgc
781 ccaagtggat tcatcattcc tttcccttta tgacagccac gtagcaaagg agattcttct
841 tcgagtactt acgctatttc agaatataaa gaactgcctc aaaatagaag gccatttagc
901 tgtgcagcct actttcactg aaggttcatt gtttttcctg ttacatggag aagaatgtgc
961 ccagaaaata agagctttag ttgatcacca tgatgcagag gtgaaggaaa aggttgtaac
1021 aataataccc aaaatctgat tggtcatatt tttccaaaga gtaatgcagt ctggatataa
1081 atgtattttc tgtcttcctt ataaggggat tctcccagct gctaaattta aacagtaaat
1141 atcacatttt gtcattaaca cagaaaaaaa aaaaaaaaaa aaaaaaaa
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