LOCUS BC003576 3124 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens actinin, alpha 1, mRNA (cDNA clone MGC:2358 IMAGE:3547017), complete cds. ACCESSION BC003576 VERSION BC003576.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3124) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3124) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: p Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12025669. FEATURES Location/Qualifiers source 1..3124 /db_xref="H-InvDB:HIT000031614" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2358 IMAGE:3547017" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3124 /gene="ACTN1" /db_xref="GeneID:87" /db_xref="HGNC:HGNC:163" /db_xref="MIM:102575" CDS 243..2921 /gene="ACTN1" /codon_start=1 /product="actinin, alpha 1" /protein_id="AAH03576.1" /db_xref="GeneID:87" /db_xref="HGNC:HGNC:163" /db_xref="MIM:102575" /translation="MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSH LRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIAS KGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAP YKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDI PKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLM EDYEKLASDLLEWIRRTIPWLENRVPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQL EINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQVEKGYEEWLLNEIRRLERL DHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQDR VEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETID QLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERL AILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEHAR QQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYK PKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDA KGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSI VDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRRELPPDQ AEYCIARMAPYTGPDSVPGALDYMSFSTALYGESDL" BASE COUNT 779 a 936 c 896 g 513 t ORIGIN 1 ggagattagg tccaagcgcc cgcccagagg caggcagtcc gcgagcccag ccgccgctgt 61 cgccgccagt agcagccttc gccagcagcg ccgcggcgga accgggcgca ggggagcgag 121 cccggccccg ccagcccagc ccagcccagc ccagccctac tccctcccca cgccagggca 181 gcagccgttg ctcagagaga aggtggagga agaaatccag accctagcac gcgcgcacca 241 tcatggacca ttatgattct cagcaaacca acgattacat gcagccagaa gaggactggg 301 accgggacct gctcctggac ccggcctggg agaagcagca gagaaagaca ttcacggcat 361 ggtgtaactc ccacctccgg aaggcgggga cacagatcga gaacatcgaa gaggacttcc 421 gggatggcct gaagctcatg ctgctgctgg aggtcatctc aggtgaacgc ttggccaagc 481 cagagcgagg caagatgaga gtgcacaaga tctccaacgt caacaaggcc ctggatttca 541 tagccagcaa aggcgtcaaa ctggtgtcca tcggagccga agaaatcgtg gatgggaatg 601 tgaagatgac cctgggcatg atctggacca tcatcctgcg ctttgccatc caggacatct 661 ccgtggaaga gacttcagcc aaggaagggc tgctcctgtg gtgtcagaga aagacagccc 721 cttacaaaaa tgtcaacatc cagaacttcc acataagctg gaaggatggc ctcggcttct 781 gtgctttgat ccaccgacac cggcccgagc tgattgacta cgggaagctg cggaaggatg 841 atccactcac aaatctgaat acggcttttg acgtggcaga gaagtacctg gacatcccca 901 agatgctgga tgccgaagac atcgttggaa ctgcccgacc ggatgagaaa gccatcatga 961 cttacgtgtc tagcttctac cacgccttct ctggagccca gaaggcggag acagcagcca 1021 atcgcatctg caaggtgttg gccgtcaacc aggagaacga gcagcttatg gaagactacg 1081 agaagctggc cagtgatctg ttggagtgga tccgccgcac aatcccgtgg ctggagaacc 1141 gggtgcccga gaacaccatg catgccatgc aacagaagct ggaggacttc cgggactacc 1201 ggcgcctgca caagccgccc aaggtgcagg agaagtgcca gctggagatc aacttcaaca 1261 cgctgcagac caagctgcgg ctcagcaacc ggcctgcctt catgccctct gagggcagga 1321 tggtctcgga catcaacaat gcctggggct gcctggagca ggtggagaag ggctatgagg 1381 agtggttgct gaatgagatc cggaggctgg agcgactgga ccacctggca gagaagttcc 1441 ggcagaaggc ctccatccac gaggcctgga ctgacggcaa agaggccatg ctgcgacaga 1501 aggactatga gaccgccacc ctctcggaga tcaaggccct gctcaagaag catgaggcct 1561 tcgagagtga cctggctgcc caccaggacc gtgtggagca gattgccgcc atcgcacagg 1621 agctcaatga gctggactat tatgactcac ccagtgtcaa cgcccgttgc caaaagatct 1681 gtgaccagtg ggacaatctg ggggccctaa ctcagaagcg aagggaagct ctggagcgga 1741 ccgagaaact gctggagacc attgaccagc tgtacttgga gtatgccaag cgggctgcac 1801 ccttcaacaa ctggatggag ggggccatgg aggacctgca ggacaccttc attgtgcaca 1861 ccattgagga gatccaggga ctgaccacag cccatgagca gttcaaggcc accctccctg 1921 atgccgacaa ggagcgcctg gccatcctgg gcatccacaa tgaggtgtcc aagattgtcc 1981 agacctacca cgtcaatatg gcgggcacca acccctacac aaccatcacg cctcaggaga 2041 tcaatggcaa atgggaccac gtgcggcagc tggtgcctcg gagggaccaa gctctgacgg 2101 aggagcatgc ccgacagcag cacaatgaga ggctacgcaa gcagtttgga gcccaggcca 2161 atgtcatcgg gccctggatc cagaccaaga tggaggagat cgggaggatc tccattgaga 2221 tgcatgggac cctggaggac cagctcagcc acctgcggca gtatgagaag agcatcgtca 2281 actacaagcc aaagattgat cagctggagg gcgaccacca gctcatccag gaggcgctca 2341 tcttcgacaa caagcacacc aactacacca tggagcacat ccgtgtgggc tgggagcagc 2401 tgctcaccac catcgccagg accatcaatg aggtagagaa ccagatcctg acccgggatg 2461 ccaagggcat cagccaggag cagatgaatg agttccgggc ctccttcaac cactttgacc 2521 gggatcactc cggcacactg ggtcccgagg agttcaaagc ctgcctcatc agcttgggtt 2581 atgatattgg caacgacccc cagggagaag cagaatttgc ccgcatcatg agcattgtgg 2641 accccaaccg cctgggggta gtgacattcc aggccttcat tgacttcatg tcccgcgaga 2701 cagccgacac agatacagca gaccaagtca tggcttcctt caagatcctg gctggggaca 2761 agaactacat taccatggac gagctgcgcc gcgagctgcc acccgaccag gctgagtact 2821 gcatcgcgcg gatggccccc tacaccggcc ccgactccgt gccaggtgct ctggactaca 2881 tgtccttctc cacggcgctg tacggcgaga gtgacctcta atccaccccg cccggccgcc 2941 ctcgtcttgt gcgccgtgcc ctgccttgca cctccgccgt cgcccatctc ctgcctgggt 3001 tcggtttcag ctcccagcct ccacccgggt gagctggggc ccacgtggca tcgatcctcc 3061 ctgcccgcga agtgacagtt tacaaaatta ttttctgcaa aaaaaaaaaa aaaaaaaaaa 3121 aaaa //