LOCUS BC003554 1303 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog,
yeast), mRNA (cDNA clone MGC:1316 IMAGE:3537280), complete cds.
ACCESSION BC003554
VERSION BC003554.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1303)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1303)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: p Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33359693.
FEATURES Location/Qualifiers
source 1..1303
/db_xref="H-InvDB:HIT000031592"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1316 IMAGE:3537280"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1303
/gene="UBE2E3"
/gene_synonym="UBCH9"
/gene_synonym="UbcM2"
/db_xref="GeneID:10477"
/db_xref="HGNC:HGNC:12479"
/db_xref="MIM:604151"
CDS 102..725
/gene="UBE2E3"
/gene_synonym="UBCH9"
/gene_synonym="UbcM2"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2E 3 (UBC4/5
homolog, yeast)"
/protein_id="AAH03554.1"
/db_xref="GeneID:10477"
/db_xref="HGNC:HGNC:12479"
/db_xref="MIM:604151"
/translation="MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQ
QKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPG
SVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTIS
KVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYAT"
BASE COUNT 404 a 277 c 264 g 358 t
ORIGIN
1 ccttaaggaa gggttttttt ctctctccct cccccacacc gtagcggcgc gcgagcgggc
61 cgggcgggcg gccgagtttt ccaagagata acttcaccaa gatgtccagt gataggcaaa
121 ggtccgatga tgagagcccc agcaccagca gtggcagttc agatgcggac cagcgagacc
181 cagccgctcc agagcctgaa gaacaagagg aaagaaaacc ttctgccacc cagcagaaga
241 aaaacaccaa actctctagc aaaaccactg ctaagttatc cactagtgct aaaagaattc
301 agaaggagct agctgaaata acccttgatc ctcctcctaa ttgcagtgct gggcctaaag
361 gagataacat ttatgaatgg agatcaacta tacttggtcc accgggttct gtatatgaag
421 gtggtgtgtt ttttctggat atcacatttt catcagatta tccatttaag ccaccaaagg
481 ttactttccg caccagaatc tatcactgca acatcaacag tcagggagtc atctgtctgg
541 acatccttaa agacaactgg agtcccgctt tgactatttc aaaggttttg ctgtctattt
601 gttccctttt gacagactgc aaccctgcgg atcctctggt tggaagcata gccactcagt
661 atttgaccaa cagagcagaa cacgacagga tagccagaca gtggaccaag agatacgcaa
721 cataattcac ataatttgta tgcagtgtga aggagcagaa ggcatcttct cactgtgctg
781 caaatcttta tagcctttac aatacggact tctgtgtata tgttatactg attctactct
841 gcttttatcc tttggagcct gggagactcc ccaaaaaggt aaatgctatc aagagtagaa
901 ctttgtagct gtagattagt tatgtttaaa acgcctactt gcaagtcttg cttctttggg
961 atatcaaaat gtattttgtg atgtactaag gatactggtc ctgaagtcta ccaaatatta
1021 tagtgcattt tagcctaatt cattatctgt atgaagttat aaaagtagct gtagatggct
1081 aggaattatg tcatttgtat taaacccaga tctatttctg agtatgtggt tcatgctgtt
1141 gtgaaaaatg ttttaccttt tacctttgtc agtttgtaat gagaggattt ccttttaccc
1201 tttgtagctc agagagcacc tgatgtatca tctcaaacac aataaacatg ctcctgaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//