LOCUS BC003530 1812 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptides B and B1,
mRNA (cDNA clone IMAGE:3608728), with apparent retained intron.
ACCESSION BC003530
VERSION BC003530.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1812)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1812)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: i Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38149990
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1812
/db_xref="H-InvDB:HIT000258902"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3608728"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 422 a 465 c 491 g 434 t
ORIGIN
1 gcattttacg tggtgctgca tttccggtag cggcggcggg aaatcggctg tgggagagag
61 gctaggcctc tgaggaggcg aatccggcgg gtatcagagc catcagaacc gccaccatga
121 cggtgggcaa gagcagcaag atgctgcagc atattgatta caggatgagg tgcatcctgc
181 aggacggccg gatcttcatt ggcaccttca aggcttttga caagcacatg aatttgatcc
241 tctgtgactg tgatgagttc agaaagatca agccaaagaa ctccaaacaa gcagaaaggg
301 aagagaagcg agtcctcggt ctggtgctgc tgcgagggga gaatctggtc tcaatgacag
361 tagagggacc tcctcccaaa gatactggta ttgctcgagt tccacttgct ggagctgccg
421 ggggcccagg gatcggcagg gctgctggca gaggaatccc agctggggtt cccatgcccc
481 aggctcctgc aggacttgct gggccagtcc gtggggttgg cgggccatcc caacaggtga
541 tgaccccaca aggaagaggt actgttgcag ccgctgcagc tgctgccaca gccagtattg
601 ccggggctcc aacccagtac ccacctggcc gtgggggtcc tcccccacct atgggccgag
661 gagcaccccc tccaggcatg atgggcccac ctcctggtat gagacctcct atgggtcccc
721 caatggggat cccccctgga agagggactc caatgggcat gccccctccg ggaatgcggc
781 ctcctccccc tgggatgcga ggtaagtgcc tgcagtggtg actttggctt ctttccctag
841 agcctagtgg gataggaaat ggagggaaga ttgcatttag atcatatccc atgggctttc
901 aagccttaaa tctagggaaa tccagaaagg aaagagaaga gggaacattt cttaaattgg
961 gcttacttcc cctcttagaa aagttagagc agccatgcac ccagggtgtt tctcaatatc
1021 taaggcagcg gcctcaggac acaatgaaat aatgcattct gaggatccct aacagaagtt
1081 atgagattgt cttatgctct ttggtttgac agtgcctagt aattaagagg gggctctggg
1141 ctttgctgta ctattatgga tttctcttta acttcagttg gagaaattct gagatcagtc
1201 cccacatgga tgagaaaata ggcccccagg gagtttggac tccaagccca gtgttctttc
1261 cctataagat aacccatggg caaacttggt gacccctgtt tctctagtct ggattattcc
1321 tctatgggtt tttatagaca taggaaccca gtcagcctca gagtagtccc tagttagcac
1381 atatgccatg tatacccctc tcctcactcg attactgcag ggcgtgggag gctggggcag
1441 ggttggggat tcaagttgca gatcaggcac tgactaaact tcttactctt acttcaggcc
1501 ttctttgacc cttggccaca gagtatggaa gtagctccgc agaggcgtgg gctcgattcc
1561 tcagggccac gttaccacag acctgtttgt ttcttatgct gttgttcgtg gagtctcatg
1621 ggattgtctg gtttccctta cagggccccc tcccccggga atgcgcccac caaggcccta
1681 gactcatctt ggccctcctc agctccctgc ctgtttcccg taaggctgta catagtcctt
1741 ttatctcctt gtggcctatg aaactggttt ataataaact cttaagagaa cattaaaaaa
1801 aaaaaaaaaa aa
//