LOCUS BC003517 1991 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens ataxin 7-like 1, mRNA (cDNA clone MGC:10760 IMAGE:3542589), complete cds. ACCESSION BC003517 VERSION BC003517.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1991) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1991) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 13 Row: o Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1991 /db_xref="H-InvDB:HIT000050426" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10760 IMAGE:3542589" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1991 /gene="ATXN7L1" /db_xref="GeneID:222255" /db_xref="HGNC:HGNC:22210" CDS 124..1725 /gene="ATXN7L1" /codon_start=1 /product="ATXN7L1 protein" /protein_id="AAH03517.2" /db_xref="GeneID:222255" /db_xref="HGNC:HGNC:22210" /translation="MDGADESEKLDCQFSTHHPRPLAFCSFGSRLMGRGYYVFDRRWD RFRFALNSMVEKHLNSQMWKHRNPSHRASGPSPLFRTCLTNLLSLSNIGAAWVSTLES VAPRYPLNLAAQTPGPGGPEPGGMAADGGVEDIRKKRNGQDSFFFNKHLTLHQEPPTQ YSLSARKIPPAADSPLPSPAAHITTPVPASVLQPFSNPSAVYLPSAPISSRLTSSYIM TSAMLSNAAFVTSPDPSALMSHTTAFPHVAATLSIMDSTFKAPSAVSPIPAVIPSPSH KPSKTKTSKSSKVKDLSTRSDESPSNKKRKPQSSTSSSSSSSSSSLQTSLSSPLSGPH KKNCVLNASSALNSYQAAPPYNSLSVHNSNNGVSPLSAKLEPSGRTSLPGGPADIVRQ VGAVGGSSDSCPLSVPSLALHAGDLSLASHNAVSSLPLSFDKSEGKKRKNSSSSSKAC KITKMPGMNSVHKKNPPSLLAPVPDPVNSTSSRQVRDLLAPPSPALGGRGSWAAPLLS RAAPTGNTSLIPVLVFPEGSFHPLL" BASE COUNT 485 a 640 c 438 g 428 t ORIGIN 1 ccatcatctg caaatagcat aagcagcagc acatcttcaa atcatagcgg ccacactcca 61 gagcccccac tcccaccggt tggaggtgac ctcgccagcc gactgtccag tgatgaaggg 121 gagatggacg gagccgacga atccgagaag ctagactgtc agttctccac gcaccacccc 181 agacctctgg cgttttgctc atttgggagt cgcctcatgg gacgagggta ctatgtgttt 241 gatagaagat gggatcgttt tcgattcgca ctaaactcca tggtagaaaa acacctgaat 301 tcacagatgt ggaagcacag aaacccgagc cacagggcat caggtccctc ccccctgttc 361 aggacttgcc taaccaatct gctgtcactg agcaacattg gggctgcctg ggtgtcaact 421 ctggagagcg tagcaccccg ctaccctctc aacctcgctg cccaaacccc aggccccggc 481 gggcccgaac ctggagggat ggcagccgat gggggcgtgg aagacattag gaagaaaagg 541 aacggccaag actctttttt ctttaacaag catttaactc tgcatcagga gccgccaaca 601 cagtattctc tttcagccag gaagatccct cctgcggcag atagccccct gccctcgcca 661 gcagcccaca tcaccacccc cgttccagca tccgttttgc agcctttcag caaccccagt 721 gctgtgtatc ttccttcagc tcccatcagc tcgaggctca cctcttctta cataatgaca 781 tcagccatgc tctcaaacgc agctttcgtg acatcgccgg acccgagcgc cctcatgtcc 841 cacaccacag ctttccctca tgtggccgca accctcagca tcatggactc aaccttcaag 901 gccccatccg ccgtgtcccc gataccagcc gtcatccctt ccccatccca caagccatcc 961 aaaaccaaaa ccagcaaatc ctcaaaagtc aaagacctgt ccacccgtag cgacgagtct 1021 ccaagtaaca aaaaaaggaa gccacagtct tcgacttcct cctcctcctc ctcctcctcc 1081 tcttccttgc agacatccct ctcgtctcca ctgtcagggc ctcacaaaaa gaactgtgtt 1141 ttgaatgcca gttctgcttt gaactcctat caggcggccc ctccctataa cagcctgtct 1201 gtgcacaact caaacaatgg ggtgagccca ctcagtgcca aactggagcc ctcaggacgg 1261 acctcgctgc ccggcggccc cgcggacata gtgagacagg tgggcgcggt gggaggcagc 1321 agtgactcct gtcccctctc tgtgccctcc cttgcgctcc acgcagggga cctctctctg 1381 gcctcacaca atgctgtgtc ttctctgccc ctctcttttg acaaatcaga aggaaaaaag 1441 cgtaagaact cgagttctag tagcaaagcc tgtaaaatca ctaaaatgcc tggtatgaat 1501 agcgttcaca aaaagaaccc gcccagcctt ctcgcaccgg tgcccgatcc cgttaacagc 1561 acctcctctc ggcaggtaag ggacctcctg gcaccgcctt caccggctct ggggggcagg 1621 gggagctggg cagcgcccct gcttagccgg gcggctccga caggtaacac aagcttgatt 1681 cctgttctcg ttttccccga aggcagtttt caccctctgc tttgagagca ctttactgaa 1741 caagtacttg ataccacgct cactatgtgc tagacactgt tctcggcact ttacggttgt 1801 tacctcactg agtcctcacg acaccccagt gcagtgagtg cagttatcac tttacagatg 1861 agtaaactga ggcacagaga gattctgagt tccccactcc acatcggtca gttttatctt 1921 ttgaggttct gagaacattg tcattaaaga gttctgttgc taaaaaaaaa aaaaaaaaaa 1981 aaaaaaaaaa a //