LOCUS BC003516 2236 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TBC1 domain family, member 17, mRNA (cDNA clone
MGC:10751 IMAGE:3050014), complete cds.
ACCESSION BC003516
VERSION BC003516.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2236)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2236)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 13 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13375951.
FEATURES Location/Qualifiers
source 1..2236
/db_xref="H-InvDB:HIT000031571"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10751 IMAGE:3050014"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2236
/gene="TBC1D17"
/gene_synonym="FLJ12168"
/db_xref="GeneID:79735"
/db_xref="HGNC:HGNC:25699"
CDS 153..2099
/gene="TBC1D17"
/gene_synonym="FLJ12168"
/codon_start=1
/product="TBC1 domain family, member 17"
/protein_id="AAH03516.1"
/db_xref="GeneID:79735"
/db_xref="HGNC:HGNC:25699"
/translation="MEGAGYRVVFEKGGVYLHTSAKKYQDRDSLIAGVIRVVEKDNDV
LLHWAPVEEAGDSTQILFSKKDSSGGDSCASEEEPTFDPGYEPDWAVISTVRPQPCHS
EPTRGAEPSCPQGSWAFSVSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGG
TRALLRVLSRYLLLASSPQDSRLYLVFPHDSSALSNSFHHLQLFDQDSSNVVSRFLQD
PYSTTFSSFSRVTNFFRGALQPQPEGAASDLPPPPDDEPEPGFEVISCVELGPRPTVE
RGPPVTEEEWARHVGPEGRLQQVPELKNRIFSGGLSPSLRREAWKFLLGYLSWEGTAE
EHKAHIRKKTDEYFRMKLQWKSVSPEQERRNSLLHGYRSLIERDVSRTDRTNKFYEGP
ENPGLGLLNDILLTYCMYHFDLGYVQGMSDLLSPILYVIQNEVDAFWCFCGFMELVQG
NFEESQETMKRQLGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPD
VLRLWEVLWTGLPGPNLHLLVACAILDMERDTLMLSGFGSNEILKHINELTMKLSVED
VLTRAEALHRQLTACPELPHNVQEILGLAPPAEPHSPSPTASPLPLSPTRAPPTPPPS
TDTAPQPDSSLEILPEEEDEGADS"
BASE COUNT 425 a 752 c 641 g 418 t
ORIGIN
1 cccttctgaa aaatggtttc acccgctccg tctctagaac gggtcgggcc gctaccactg
61 tccggcccgg aggggaactg ttttctccgg aagtgacaac acgctgacta ggaaaaggag
121 gaggcggggc agtggggcct tcggcggcga ctatggaagg agccggctac agggtggtgt
181 ttgagaaggg cggagtgtac ctgcacacca gcgctaagaa gtatcaggac cgagactctc
241 tcatcgctgg tgtcatccgt gtcgtggaaa aggacaatga cgtcctcctg cactgggctc
301 ctgtagagga ggctggagat tccacccaaa tcctcttctc caagaaggac tccagtgggg
361 gtgactcatg tgcttctgag gaggaaccaa cctttgaccc cggctatgaa cctgactggg
421 ctgtcatcag cactgtgcgg ccacagccct gccactcaga gcccacgaga ggtgcagagc
481 ccagctgccc ccagggctcc tgggccttct cagtgagtct gggggagcta aagtccatcc
541 gccgctccaa gccaggcctc agctgggcct acctggttct ggtgacccag gctggaggtt
601 ccctgcccgc actgcacttc caccgcgggg gcacccgcgc cctgctccgc gtcctcagcc
661 gctacctgct gttggccagc tccccgcagg actcccgcct ctaccttgtc ttcccccacg
721 actcctctgc tctctccaac tccttccacc acctgcagct ctttgaccag gacagctcca
781 atgtggtgtc acgcttcctc caggatccct actccaccac cttcagcagc ttctcccgag
841 tgaccaactt cttccggggt gccctgcagc cacagcctga gggagccgcc tccgaccttc
901 ccccgccacc cgacgatgag cccgagcctg gattcgaggt catttcctgt gtggagctgg
961 ggcctcggcc aaccgtggag cggggccctc cagttacaga ggaggagtgg gcacgccacg
1021 tgggccctga aggtcgcctg cagcaggtcc ctgagctgaa gaaccggatc ttctcggggg
1081 gtctgagccc cagcctgcgg cgcgaggcct ggaagttcct cctagggtac ctcagctggg
1141 aaggcacagc tgaggagcac aaggcccaca tacgcaagaa aacggatgag tatttccgca
1201 tgaagctgca gtggaaatct gtgagccctg agcaggagcg gagaaactca cttctgcatg
1261 gataccgcag cctcatcgaa agggatgtga gccgcactga caggaccaac aagttctacg
1321 agggtcccga gaacccgggg ctgggcctgc tgaacgatat cctcctcacc tactgcatgt
1381 atcacttcga cctcggctac gtccagggca tgagtgatct tctctccccg atcctctacg
1441 tcattcagaa cgaggtggat gctttctggt gtttctgtgg cttcatggag ctcgtgcaag
1501 ggaactttga agagagccag gagaccatga agcggcaact cgggcgactg ctgctgctcc
1561 tgagggtgct ggaccccctg ctctgcgact tcctggattc ccaggactcc ggctctctct
1621 gcttctgttt ccggtggctg ctcatctggt tcaagaggga attccccttc ccggatgtcc
1681 ttcggctgtg ggaggtgctg tggacagggc tccctggccc caatctgcac ctgctggtgg
1741 cctgcgccat cctggacatg gagagggaca ccctcatgct gtccggcttc ggctccaatg
1801 agatcctcaa gcacatcaac gagctgacta tgaagctgag cgtggaggac gtgctgaccc
1861 gcgccgaggc cctgcaccgc cagctaaccg cctgccccga gctgccccac aacgtgcagg
1921 agatcctggg gctggccccg cccgcagagc cccacagccc ctcgcccacc gcctccccgc
1981 tgcctctgtc gcccacccgg gccccgccca ccccgccgcc ctccacggac acagccccgc
2041 agcccgacag cagcctggag atcctgcccg aggaggagga cgagggcgcc gactcctaac
2101 cccgccaggc agcctcgttc tgcacaggca ctttagcccg agccaggcac acctgcgagg
2161 gggcaggtgt gctccgccgc cctgctgata agctggcttc attaaactga cacttctcaa
2221 aaaaaaaaaa aaaaaa
//