LOCUS BC003413 1021 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens GAR1 ribonucleoprotein homolog (yeast), mRNA (cDNA
clone MGC:4917 IMAGE:3451136), complete cds.
ACCESSION BC003413
VERSION BC003413.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1021)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1021)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15011915.
FEATURES Location/Qualifiers
source 1..1021
/db_xref="H-InvDB:HIT000031555"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4917 IMAGE:3451136"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1021
/gene="GAR1"
/db_xref="GeneID:54433"
/db_xref="HGNC:HGNC:14264"
/db_xref="MIM:606468"
CDS 49..702
/gene="GAR1"
/codon_start=1
/product="GAR1 ribonucleoprotein homolog (yeast)"
/protein_id="AAH03413.1"
/db_xref="GeneID:54433"
/db_xref="HGNC:HGNC:14264"
/db_xref="MIM:606468"
/translation="MSFRGGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGG
GRGGFGRGGGRGGFNKGQDQGPPERVVLLGEFLHPCEDDIVCKCTTDENKVPYFNAPV
YLENKEQIGKVDEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPR
PPGEKGPPRGGGRGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGFRGRGH"
BASE COUNT 296 a 166 c 300 g 259 t
ORIGIN
1 ccgctgttat acgtcacttc cacggctcag cgtcagggag gagagagaat gtcttttcga
61 ggcggaggtc gtggaggctt taatcgaggt ggtggaggtg gcggcttcaa ccgaggcggc
121 agcagcaacc acttccgagg tggaggcggc ggtggaggcg gcggcaattt cagaggcggc
181 ggcaggggag gatttggacg agggggtggc cgcggaggct ttaacaaagg ccaagaccaa
241 ggacctccag aacgtgtagt cttattagga gagttcctgc atccctgtga agatgacata
301 gtttgtaaat gtaccacaga tgaaaataag gtgccttatt tcaatgctcc tgtttactta
361 gaaaacaaag aacaaattgg aaaagtggat gaaatatttg gacaactcag agatttttat
421 ttttcagtta agttgtcaga aaacatgaag gcttcatcct ttaaaaaact acagaagttt
481 tatatagacc catataagct gctgccactg cagaggtttt tacctcgacc tccaggtgag
541 aaaggacctc caagaggtgg tggcagggga ggccgaggag gaggaagagg aggaggtggc
601 agaggtggtg gcagaggtgg tggttttaga ggtggaagag gaggtggagg tgggggcttc
661 agaggaggaa gaggtggtgg tttcagaggg agaggacatt aagtgaaaca gttgacagac
721 atcaccagtt gacttctgca ttaacctgca tgatctgttt ctactatgga ttggaaactt
781 gtttcttgaa caagtcttga agatcttggt cattttatga caatggatct aaaatgtcag
841 catcatgcaa agtgcaacgg aatagtgaat tttgctctaa aagagcatga acaagtcttt
901 ctaatgtttt gtacagtgcc tggcactctg tgggtgctca ataaatggat aggagttttc
961 atttgaagca tatttgaatt tttaaaataa agtgttttat tcccttaaaa aaaaaaaaaa
1021 a
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