LOCUS BC003397 1924 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 27, mRNA (cDNA clone
MGC:4960 IMAGE:3448518), complete cds.
ACCESSION BC003397
VERSION BC003397.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1924)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1924)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: m Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57527755.
FEATURES Location/Qualifiers
source 1..1924
/db_xref="H-InvDB:HIT000031543"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4960 IMAGE:3448518"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1924
/gene="C1orf27"
/gene_synonym="FLJ20505"
/gene_synonym="odr-4"
/gene_synonym="TTG1"
/db_xref="GeneID:54953"
/db_xref="HGNC:HGNC:24299"
/db_xref="MIM:609335"
CDS 70..1434
/gene="C1orf27"
/gene_synonym="FLJ20505"
/gene_synonym="odr-4"
/gene_synonym="TTG1"
/codon_start=1
/product="chromosome 1 open reading frame 27"
/protein_id="AAH03397.2"
/db_xref="GeneID:54953"
/db_xref="HGNC:HGNC:24299"
/db_xref="MIM:609335"
/translation="MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILA
TRTPPKEEQSENLKHPKAKLDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELAN
DFQNALRRLMFAVEKSINRKRLWNFTEEEVSERVTLHICASTKKIFCRTYDIHDPKSS
ARPADWKYQSGLSSSWLSLECTVHINIHIPLSATSVSYTLEKNTKNGLTRWAKEIENG
VYLINGQVKDEDCDLLEGQKKSSRGNTQATSHSFDVRVLTQLLLNSDHRSTATVQICS
GSVNLKGAVKCRAYIHSSKPKVKDAVQAVKRDILNTVADRCEMLFEDLLLNEIPEKKD
SEKEFHVLPYRVFVPLPGSTVMLCDYKFDDESAEEIRDHFMEMLDHTIQIEDLEIAEE
TNTACMSSSMNSQASLDNTDDEQPKQPIKTTMLLKIQQNIGVIAAFTVAVLAAGISFH
YFSD"
BASE COUNT 640 a 344 c 401 g 539 t
ORIGIN
1 agagaccgtc cgaggtaatt gtctgccacg agtgcacatt ctgaaaacag gagattttag
61 ttcctaaaaa tgggaagaac ctacattgta gaagagactg ttggccagta tctttcaaac
121 ataaatctcc aaggaaaggc ttttgtctct ggccttttaa taggacagtg ttcgtcacaa
181 aaggattatg tgattcttgc cactagaacg ccacccaaag aggagcaaag tgagaacctc
241 aaacatccca aagctaagtt ggataacttg gatgaagaat gggccacaga acatgcctgc
301 caggtatcca gaatgctacc agggggactt ttagttcttg gagtatttat tattactact
361 ttagaactgg caaatgattt tcaaaatgcc ctgcgtagac taatgtttgc tgtggaaaag
421 tctataaata gaaagagatt gtggaatttc acagaggagg aagtctcaga acgagtgaca
481 cttcacattt gtgcttctac aaaaaaaata ttttgtcgaa cttatgatat ccatgatcca
541 aagagttcag caagaccagc agattggaag tatcaaagtg gattatcatc ctcatggctt
601 tctttagagt gtacagttca cattaatatt cacatcccac tttctgctac ttctgtcagc
661 tatactctgg agaaaaatac aaagaatgga cttacacgct gggccaagga aatagaaaat
721 ggtgtttatt tgattaatgg acaagttaaa gatgaagatt gtgacctatt agaaggacag
781 aaaaaatctt ctagaggaaa tactcaagca actagtcatt cttttgatgt cagagtgcta
841 acgcagttgc tcctgaattc agaccacaga tccacagcca cagtccagat atgtagcggt
901 tctgtaaacc ttaagggtgc tgtgaaatgc agagcttata tccacagcag taaacccaaa
961 gttaaagatg ctgtgcaggc agtaaagagg gatatattga acacagttgc tgatcgttgt
1021 gaaatgctat ttgaggatct gcttttgaat gaaattccag aaaaaaaaga ttctgaaaaa
1081 gagttccacg tcctccctta tcgagtcttt gttccccttc ctggatccac tgtaatgttg
1141 tgtgattata aatttgacga tgagtcagct gaagaaatca gggaccattt tatggagatg
1201 ttggatcaca caattcaaat agaagatttg gaaattgcag aggaaacaaa cacagcttgt
1261 atgagttctt ctatgaatag tcaagcttca ttggacaaca cagatgatga acaaccaaaa
1321 caaccaatta aaactacaat gttattgaaa attcagcaaa acataggtgt gattgcagca
1381 tttacagttg cagtccttgc tgcgggtatc tcctttcatt acttcagtga ttagggtgag
1441 gcacaaagag tttcttgatc atccagagaa cattgacaga caattatgaa taataaagat
1501 gttaacaatc catctgtatt taaaacacta gcagccagat ctgctgccat gatgcctatt
1561 tggtgtgttt ctgattaaaa tgaaatcaca agctgccttg tttagcctgc tttacattgt
1621 aggtggcccg catttccaga aataacgtta tgcatctaga tggaagctgc atgtaacaaa
1681 tcattattat ctatttttaa aagcttcaaa atgatgggat atgatcatag attttagtct
1741 tactaatctg aatcacatat taatcaggac attaaaaact ttaacagagg catgatggct
1801 cacacgtata atcctaatgc tttgagaggc tgaggtagga gcatcacctg gggctgggag
1861 ggagttggag accagcctgg atgacataat gagattctgt ctctactgga aaaaaaaaaa
1921 aaaa
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