LOCUS BC003371 622 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens signal sequence receptor, delta (translocon-associated protein delta), mRNA (cDNA clone MGC:5151 IMAGE:2900758), complete cds. ACCESSION BC003371 VERSION BC003371.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 622) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 622) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: a Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5454089. FEATURES Location/Qualifiers source 1..622 /db_xref="H-InvDB:HIT000031524" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5151 IMAGE:2900758" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..622 /gene="SSR4" /gene_synonym="TRAPD" /db_xref="GeneID:6748" /db_xref="HGNC:HGNC:11326" /db_xref="MIM:300090" CDS 5..526 /gene="SSR4" /gene_synonym="TRAPD" /codon_start=1 /product="signal sequence receptor, delta (translocon-associated protein delta)" /protein_id="AAH03371.1" /db_xref="GeneID:6748" /db_xref="HGNC:HGNC:11326" /db_xref="MIM:300090" /translation="MAAMASLGALALLLLSSLSRCSAEACLEPQITPSYYTTSDAVIS TETVFIVEISLTCKNRVQNMALYADVGGKQFPVTRGQDVGRYQVSWSLDHKSAHAGTY EVRFFDEESYSLLRKAQRNNEDISIIPPLFTVSVDHRGTWNGPWVSTEVLAAAIGLVI YYLAFSAKSHIQA" BASE COUNT 140 a 190 c 166 g 126 t ORIGIN 1 ggcgatggcg gcgatggcat ctctcggcgc cctggcgctg ctcctgctgt ccagcctctc 61 ccgctgctca gccgaggcct gcctggagcc ccagatcacc ccttcctact acaccacttc 121 tgacgctgtc atttccactg agaccgtctt cattgtggag atctccctga catgcaagaa 181 cagggtccag aacatggctc tctatgctga cgtcggtgga aaacaattcc ctgtcactcg 241 aggccaggat gtggggcgtt atcaggtgtc ctggagcctg gaccacaaga gcgcccacgc 301 aggcacctat gaggttagat tcttcgacga ggagtcctac agcctcctca ggaaggctca 361 gaggaataac gaggacattt ccatcatccc gcctctgttt acagtcagcg tggaccatcg 421 gggcacttgg aacgggccct gggtgtccac tgaggtgctg gctgcggcga tcggccttgt 481 gatctactac ttggccttca gtgcgaagag ccacatccag gcctgagggc ggcaccccag 541 ccctgccctt gcttccttca ataaacatca caggacctgg gactgcacag gacctgggaa 601 aaaaaaaaaa aaaaaaaaaa aa //